SILENT_MODE BLOCK_FILE jp_KWSyDHj.concise.blc MAX_NSEQ 209 MAX_INPUT_LEN 211 OUTPUT_FILE jp_KWSyDHj.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 158 198 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 199 158 208 H SPACE SUB_CHARS 1 199 158 208 E SPACE SUB_CHARS 1 199 158 208 - SPACE STRAND 5 202 6 COLOUR_TEXT_REGION 5 202 6 202 51 STRAND 11 202 14 COLOUR_TEXT_REGION 11 202 14 202 51 STRAND 108 202 111 COLOUR_TEXT_REGION 108 202 111 202 51 STRAND 123 202 127 COLOUR_TEXT_REGION 123 202 127 202 51 STRAND 131 202 135 COLOUR_TEXT_REGION 131 202 135 202 51 STRAND 140 202 145 COLOUR_TEXT_REGION 140 202 145 202 51 STRAND 150 202 156 COLOUR_TEXT_REGION 150 202 156 202 51 HELIX 98 202 104 COLOUR_TEXT_REGION 98 202 104 202 50 STRAND 5 207 6 COLOUR_TEXT_REGION 5 207 6 207 51 STRAND 11 207 14 COLOUR_TEXT_REGION 11 207 14 207 51 STRAND 108 207 111 COLOUR_TEXT_REGION 108 207 111 207 51 STRAND 123 207 126 COLOUR_TEXT_REGION 123 207 126 207 51 STRAND 131 207 135 COLOUR_TEXT_REGION 131 207 135 207 51 STRAND 139 207 146 COLOUR_TEXT_REGION 139 207 146 207 51 STRAND 150 207 156 COLOUR_TEXT_REGION 150 207 156 207 51 HELIX 96 207 104 COLOUR_TEXT_REGION 96 207 104 207 50 STRAND 5 208 6 COLOUR_TEXT_REGION 5 208 6 208 51 STRAND 11 208 15 COLOUR_TEXT_REGION 11 208 15 208 51 STRAND 99 208 101 COLOUR_TEXT_REGION 99 208 101 208 51 STRAND 108 208 111 COLOUR_TEXT_REGION 108 208 111 208 51 STRAND 123 208 127 COLOUR_TEXT_REGION 123 208 127 208 51 STRAND 131 208 136 COLOUR_TEXT_REGION 131 208 136 208 51 STRAND 140 208 145 COLOUR_TEXT_REGION 140 208 145 208 51 STRAND 150 208 157 COLOUR_TEXT_REGION 150 208 157 208 51 HELIX 102 208 103 COLOUR_TEXT_REGION 102 208 103 208 50