SILENT_MODE
BLOCK_FILE jp_dFK6uQK.concise.blc
MAX_NSEQ 793
MAX_INPUT_LEN 795
OUTPUT_FILE jp_dFK6uQK.concise.ps
PORTRAIT
POINTSIZE 8
IDENT_WIDTH 12
X_OFFSET 2
Y_OFFSET 2
DEFINE_FONT 0 Helvetica		DEFAULT 
DEFINE_FONT 1 Helvetica		REL		0.75   
DEFINE_FONT 7 Helvetica		REL		0.6
DEFINE_FONT 3 Helvetica-Bold	DEFAULT    
DEFINE_FONT 4 Times-Bold    	DEFAULT   
DEFINE_FONT 5 Helvetica-BoldOblique	DEFAULT 
#
DEFINE_COLOUR 3  1 0.62 0.67	# Turquiose
DEFINE_COLOUR 4  1 1 0		# Yellow
DEFINE_COLOUR 5  1 0 0		# Red
DEFINE_COLOUR 7  1 0 1		# Purple
DEFINE_COLOUR 8  0 0 1		# Blue
DEFINE_COLOUR 9  0 1 0		# Green
DEFINE_COLOUR 10 0.41 0.64 1.00	# Pale blue 
DEFINE_COLOUR 11 0.41 0.82 0.67	# Pale green 
DEFINE_COLOUR 50 0.69 0.18 0.37	# Pink (helix)
DEFINE_COLOUR 51 1.00 0.89 0.00	# Gold (strand)
NUMBER_INT 10
SETUP
#
# Highlight specific residues.
# Avoid highlighting Lupas 'C' predictions by
# limiting the highlighting to the alignments 
Scol_CHARS	C 1 1 97 782   4
Ccol_CHARS	H ALL    5
Ccol_CHARS	P ALL    8
SURROUND_CHARS LIV   ALL
#
# Replace known structure types with whitespace
SUB_CHARS 1 783 97 792 H SPACE
SUB_CHARS 1 783 97 792 E SPACE
SUB_CHARS 1 783 97 792 - SPACE
STRAND 24 786 30
COLOUR_TEXT_REGION 24 786 30 786 51
STRAND 37 786 43
COLOUR_TEXT_REGION 37 786 43 786 51
STRAND 52 786 55
COLOUR_TEXT_REGION 52 786 55 786 51
STRAND 59 786 63
COLOUR_TEXT_REGION 59 786 63 786 51
STRAND 75 786 80
COLOUR_TEXT_REGION 75 786 80 786 51
STRAND 86 786 90
COLOUR_TEXT_REGION 86 786 90 786 51
HELIX 6 786 17
COLOUR_TEXT_REGION 6 786 17 786 50
HELIX 68 786 70
COLOUR_TEXT_REGION 68 786 70 786 50
STRAND 24 791 30
COLOUR_TEXT_REGION 24 791 30 791 51
STRAND 37 791 44
COLOUR_TEXT_REGION 37 791 44 791 51
STRAND 52 791 55
COLOUR_TEXT_REGION 52 791 55 791 51
STRAND 59 791 63
COLOUR_TEXT_REGION 59 791 63 791 51
STRAND 75 791 80
COLOUR_TEXT_REGION 75 791 80 791 51
STRAND 86 791 90
COLOUR_TEXT_REGION 86 791 90 791 51
HELIX 6 791 17
COLOUR_TEXT_REGION 6 791 17 791 50
HELIX 68 791 71
COLOUR_TEXT_REGION 68 791 71 791 50
STRAND 24 792 30
COLOUR_TEXT_REGION 24 792 30 792 51
STRAND 38 792 42
COLOUR_TEXT_REGION 38 792 42 792 51
STRAND 51 792 56
COLOUR_TEXT_REGION 51 792 56 792 51
STRAND 60 792 63
COLOUR_TEXT_REGION 60 792 63 792 51
STRAND 74 792 80
COLOUR_TEXT_REGION 74 792 80 792 51
STRAND 86 792 90
COLOUR_TEXT_REGION 86 792 90 792 51
HELIX 6 792 17
COLOUR_TEXT_REGION 6 792 17 792 50