QUERY : DSMDHRIERLEYYIQLLVKTVDMDRYPFYALLIDKGLSKEEGEAVMRICDELSEELATQKAQGFVTFDKLLALFAGQLNEKLDVHETIFALYEQGLYQELMEVFIDIMKHFD : QUERY
UniRef90_A0A023CSI5 : -TLEERIAKLEFHQSLLMEMIDETKKPFYYLVIKANLTKKEVDEVLSLCKQLSEVYEKQKAEGLMVFTPLLIQFAGMLHPSLPLEQTVDALLKQQMFVPLMSEFKKLMKT-- : UniRef90_A0A023CSI5
UniRef90_C9RXF5 : ESLEKRVAKLEFHQSLLMEMIDETKKPFYSLIIRADLTKEEVDAFLAFCQELADQYEQQKAEGLTIFTPLLVQFAGMLHPNLPLEQTVDALLAQQMFVPLMTELKTLIRTI- : UniRef90_C9RXF5
UniRef90_UPI00047B769A : NSIEKRLETLEYYQSLLLKIVEPAKFPFYHLVMSKGLSKDEIEEVLMICEELSRLHEEQKAQGLVIFTDLLTRFAGQLNPKLDLYETIHALHRQNLYSSLMDDFVDLM---- : UniRef90_UPI00047B769A
UniRef90_D5DAS8 : ETLESRVSRLEYYIKLLSGTSEQEAKPFIDLVVRNQLTKKEVEEILILCEDTKNEYIEQKAEGLTDFVPLLTQFVGMLNYKLTPRETVESLRYQPSYQDVMNEFFEIIQWI- : UniRef90_D5DAS8
UniRef90_F7Z322 : ESIEQKLERLEFYQTLLLKMIGTGQYPFFRLIMEKQLSKQDIEQFYALCDRLSDELKEQKADKFVFFYPLFQKFKDSLHEKLQPAEVIAACLQQGLYPELMKALKR------ : UniRef90_F7Z322
UniRef90_UPI000287D7D0 : ETIEERLERLEYYQTLILKLLDDKLSPFYKLIMEAKLTKREVEQLFNTCEELSKEYKIQKAEGLISFTPLLTQFVGMLHPSLDPRTTINALAKERKYTPLMNEFKGII---- : UniRef90_UPI000287D7D0
UniRef90_I8AJY3 : ETIEERVARLEYYNRLTVQSINLRSYPFYSLVMEKHLTEEEVEGVLSLCDVLQQHYEVYVDRGYTQFLPLLLHFAGMLSPKLKPKATIQALLAQDLYRDLMLTLDELAQRYE : UniRef90_I8AJY3
UniRef90_UPI00036511B3 : --LQKKLETLEYHQELLLQIVENPREEFSKIIVRRKLSRGEVEALFRLCEEMSIKMEEQKAEGLVYFAPLFQEFSFRLNRKLDARETVEALRKQELFSPLMDEF-------- : UniRef90_UPI00036511B3
UniRef90_UPI0002626FBD : ----EQNETINFYLQLLSRTIDTNNYPFTRMVIANNVTKGEYAVLLELLERLHHQYVTQKEEGFLDFSSLLIQFAGMLNEKLEPNKTIYALRKEGYYPSLMEEFIGILE--- : UniRef90_UPI0002626FBD
UniRef90_G9QKB6 : EDIIKRLEMLEYHQQLLIQMVDKNRHEFDWLIIKNRLTKEETAEFFELCEELNKKYQEQKADGFVFHVPLFQEFEKRLHSKLDCKEVIAACIKQGLYKELMIQLYK------ : UniRef90_G9QKB6
UniRef90_U5L990 : --LLERIEKLEYHQKLLLMMASGQTLPFYRMVVEKSLDQKEVTQFFYLCDKLSKELEEQKAEGFVYFHPLYTEFKHKLHPSLKPEMVIPACLRQNLFMDLMSELKK------ : UniRef90_U5L990
UniRef90_K6DQB8 : --IEKRLKKIEYHQQLLLEMIQTQSFPAHRLIVKNDLSEEEVEEVFRLCEELSLQFEQQKEEGFVYFNPLLTQFINSLNHKLDPEETIHAFLGQEMYVPLMEILKK------ : UniRef90_K6DQB8
UniRef90_UPI00047D2F41 : -----RNETINFHLHLLLKIKEIDQYPFTKLVIEKELTQEEYRDLIQWTDYLHKEFLAQTEEGFLDVTPLLIKFVGMLHYKLEPRQTIEALKKEGYYPSLMDAFLKL----- : UniRef90_UPI00047D2F41
UniRef90_A0A024QDU4 : ----HEAETASFHLHLLSKIMDMDKYPFTKLIIERNLTKAEYIELMDRLSLLNQQFEVQTKEGLLDFSSLLLHFAGMLTEKLEPNQTIYALKEEGVYPSLMETFITILKQ-- : UniRef90_A0A024QDU4
UniRef90_N0AR95 : NALIDKIVQLEYHQKLLLKMLSDTKLQFFKLVIEKSLREADVDAFFKLCDQLSNDLKEQKAEGFVHFNPLFDKFKVNLHPNLQAEDVIRSCLAQQLFTPLMTEFKKYI---- : UniRef90_N0AR95
UniRef90_UPI00047D8E21 : --LLNKIQLLEYHQRILLTLINNPKQDFYRMIIENGLSEQEVREFMQICDELSIKMEKQKAEGFIYFQPLFTEFLYLLPEKLDSKDVIRACSSQGLYLPLMKELNKYI---- : UniRef90_UPI00047D8E21
UniRef90_A0A024PQJ0 : ---------AEFHLSLISRIIDMRKYPFTRLIMERNITNQEYTELIKLLEDLDVIYHSQREEGLLDFSSLLIQFAGMLNEKLEPTETIYALNQEGIYKELVNEFIKIIQQ-- : UniRef90_A0A024PQJ0
UniRef90_UPI00037E59C5 : DELKERIERLEYHQKLLLDMIQPINKDFDLLIIKRRLAEREVKEFYQLCEELSAEMEKQKAEKFVFHFPLFKQFTSRLNGKLQPEETIRACLKQNIYPELMKIL-------- : UniRef90_UPI00037E59C5
UniRef90_S3FGF1 : -SLEEKVNQLSFQMELLLGLVDWSSRPFEYEVIKANLTKEEVADFYKLLDEINNQQNEQRRYGLSSVEPLLVSFVGMLHPSLDPGRILAACVKQGIALEITE---------- : UniRef90_S3FGF1
UniRef90_UPI0002FF6064 : EDLLCRIKKIEYHQRLLLKMIENQNYPVYELFVKKDLSEVDAAELFSLCDELTLKLETQKEEGFVYFTPLLTEFIRLLNPKLEPKETINAFLKQNLYRSLMEEL-------- : UniRef90_UPI0002FF6064
UniRef90_UPI00031FCA51 : DTLLEKINRLEYHQSILLMMISKSDDQFYKLIVEKSLSRKDVERFLAMCEELTIALEEQQAEGFVYFESLYRNLKDSLHPNLDAKEVIEACLRQKLYLPLMLELKKFVK--- : UniRef90_UPI00031FCA51
UniRef90_A6CRL2 : NELMKRIEKLEYQQRLLLEMIPATGHDFNRLVISKGLSENDVKEFFDLCEKLNKHSQEQKAEGFVFFAPLFKEFTDKLDARLTPEEVIEACIAQRLFPFLMEQLKR------ : UniRef90_A6CRL2
UniRef90_UPI00047D4148 : -------NLATFQLQLLSKIIDINKYPFTRLVMEYKLTEDEYNDLFTLLEVTNQEYVQQKEEGLLNYSSNLVKFAGMLNEKLDPTVTIFALHKEGYYPDLLAEFIKLLE--- : UniRef90_UPI00047D4148
UniRef90_UPI00046FB868 : ETIEQKLERLEFYQTLLMQMVQANSFPFYKLVMEKQLSKQDMEMFFKRCEALTKELQEQKADQFVFFYPLFQKFKEGLHKKLDAKEVILACKQQHLFPELMKAL-------- : UniRef90_UPI00046FB868
UniRef90_C2W4T0 : ----KRLEQAEYYVELLFQMIDEDKCPFYSLIIKKKARKKDIERILSLCEQLNEQYIKEKQEGFLLFDALLEQFEKALPHQLEVNETAEALIKQGLFQPLMKEFLRM----- : UniRef90_C2W4T0
UniRef90_UPI00047A224D : -SLEQRLERLEFYTRLLLSTLDLSEYPYYKMLIEQGLSEEEAKETEKLCEELTKELEAQKAQGYVMFDHLLTLFAGQLNEKLEVHETIFALHRQGLYKPLMSEFISIIKRYD : UniRef90_UPI00047A224D
UniRef90_C4L3M8 : -SLEEKVEHLAYQMKILLEIVDWTDRPFEYEVIRANLTKQEVESFYQLLEEIRAQQNEQLRYGYTSIEPLLVHFAGMLDVRLDVKTILEACVRQGIALDVTEPLYRQVRLLD : UniRef90_C4L3M8
UniRef90_U1N3N8 : -SLEEKINQLSFQMELLLGAVDWSERPFEHEVLKANLTRQEVVAFFALLDDIRERQNEQMRYGLSSVEPLLVHFVGMLHPHLEAETILAACVRQGMALDVTEPLYRQVK--- : UniRef90_U1N3N8
UniRef90_UPI000462732B : -SLEEKVKQLSYQMELLMKSVDWSDRPFEYEIIRANLTKEDVEAFHTLLEEIRQQQNEQGRYGLSSVEPLLVSFVGMLHPALDPEKILAACVKQQIKLDVTEPLYQQVK--- : UniRef90_UPI000462732B
UniRef90_K6CGH6 : ----QRIHLLEYHQKLFVKLLNNPKLEFYKLVIENGLNEQETEKFFDLCDKLSMKLEEQKAEGYVYFHPLFEQLSAALPANLKMEEVIRACLLQNLYKPLFLEF-------- : UniRef90_K6CGH6
UniRef90_UPI00030D04FD : ---------------------DLESQPFYKLVISKNLNKKELAEVYSICEELDKKYEEQKKQGLIDFVPLLTQFVGQLPYKLNPHETIYALQQQKLYPGLMDKLASLVRR-- : UniRef90_UPI00030D04FD
UniRef90_M8DQQ4 : -SIEQRIEKLEYYCSLMLDMISPEKKPFYALVIRYGLTKKEVEDTLRLCEQLTEQYKQQKEEGFVIFTSLFTEFASALHPNLPLAETIDALQKQQLFVPLMNEFQQLLHTFN : UniRef90_M8DQQ4
UniRef90_UPI000369909E : ----KRLEQAEYYVSLLFNMIDEEKCPFYSLIIKKKVMKRDVERLLVLCEQMNEQYIIEKQEGLLLFDELLYKFERALPQSLEGQEAAEALERQGLFQPLMQEFLRMI---- : UniRef90_UPI000369909E
UniRef90_UPI00047B1323 : ETLEDRIERLEFYSRLTLQTVDYTQFPFFTLVMSNKLTEQEVNEVLTLCDELQKKYEQQKEEGLVNFVPLLIHFAGMLTPKLKPKETIQAIKGQGLYPNLMEKLYEIASRYE : UniRef90_UPI00047B1323
UniRef90_A0A024PI69 : ---ENHCETFTFQLKLLLDVEEMKKYPFTKLIIEKNVTEKEYQHTLCLLKELNHRYEEDMESGLIDHSSLLLHFAGMLCYKLPINETLCALHQEGFYLELTEQLIS------ : UniRef90_A0A024PI69
UniRef90_UPI00031CED05 : ENLLKRIEVLEYHQQLLIRMLKETNQPLYYFIIVNNLSRSETEHILEICEMMNKKFQKQKAEGYVTFYPLLQELQANISPSISIKDLVDACIKQEVYVLFMEEMKQLLNQ-- : UniRef90_UPI00031CED05
UniRef90_W1SR64 : ELLLERINLLEYHQKLLIKLLKNPELKFYQLVIENGITKQEKEKFYYLCDELSMKLEKQKAEGYVYFQPLFDELSAFLPTELSMKEVINACLVQNIYKPL---FLELAKY-- : UniRef90_W1SR64
UniRef90_UPI0003FF466F : -------ETAAFHLQLLSKIIDMDEYPFTKLVIERNLTREEFAILMERLEKLNEQYEAQKEEGLIHFSSLLIHFAGMLTEKLEPDSTINALQREGFYPSLMNEFIRIIKQ-- : UniRef90_UPI0003FF466F
UniRef90_UPI00047CD284 : NELMDRINLLEYHQKLLLKLINNPKLELYKLIIENGITEQEAGQFFSLCDKMNLKLEEQKAEGYVNFHPLFHELSSSLPSTLKIKEVINACLKQKVCLSLFQEL-------- : UniRef90_UPI00047CD284
UniRef90_A8FBL0 : -SIEERMSQLEYYMELLLTATDMSRYPYYALLMRQQVSKEEAQEIERICAELSEEMDKQKAQGYVMFDDMLALFAGQLIEKLDVHETIFALHDQGLFQPLMNEFIKIIKQFD : UniRef90_A8FBL0
UniRef90_W9AIJ8 : -----------FHLQLLSKVIDLNKFPMIKMVLEKNVTDSEYNELLQLLSRLNEKYEIQQEEGLLDYSSLLIEFAGMLSEKLDPDATIYALKKEGYYPSLMAAFIKIIE--- : UniRef90_W9AIJ8
UniRef90_L5NAX6 : -----------FHLQLLLDVEEMDRYPFTRLVIDREVTKREYRQTMHLLDTLEARYEQEKEIGLMDHTPLLLHYAGMLCPKLPV---------------------------- : UniRef90_L5NAX6
UniRef90_UPI000225B7AC : -------NLATFQIQLLTNIIDIKKFPFTKLIMERRVTEKEYTELFEMLERLNMEYRQQKEEGLLDYSTHLMRFVGMLTEKLDPTETILALECEGYYPELLGEFIRLIH--- : UniRef90_UPI000225B7AC
UniRef90_UPI000479ED56 : ---------MDFYIRLLVSMEQFEQYPFTRMIIQNGLNEEEYQELLRLLERLNAELVNLKHDGMMDFTKLLIHFAGMLNVKLHPDEVMDALISQQMYVDLMKTFKHI----- : UniRef90_UPI000479ED56
UniRef90_UPI0001E89104 : --MEERLATLEFYMELLIKQMDRSTFPWDYLIIKGKLSRREVQALYQLCEDLSKEMEKTK---------------------------------------------------- : UniRef90_UPI0001E89104
: 1---------11--------21--------31--------41--------51--------61--------71--------81--------91--------101-------11 :
OrigSeq : DSMDHRIERLEYYIQLLVKTVDMDRYPFYALLIDKGLSKEEGEAVMRICDELSEELATQKAQGFVTFDKLLALFAGQLNEKLDVHETIFALYEQGLYQELMEVFIDIMKHFD : OrigSeq
Jnet : -HHHHHHHHHHHHHHHHHHH--------HHHHHH----HHHHHHHHHHHHHHHHHHHHHHHH------HHHHHHHH-------HHHHHHHHHH----HHHHHHHHHHHHH-- : Jnet
jhmm : -HHHHHHHHHHHHHHHHHHH---------EEEEE----HHHHHHHHHHHHHHHHHHHHHHHH---EE-HHHHHHHH-------HHHHHHHHHH----HHHHHHHHHHHHH-- : jhmm
jpssm : --HHHHHHHHHHHHHHHHHH-------HHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHH-------HHHHHHHHHH-----HHHHHHHHHHHH-- : jpssm
Lupas 14 : ------------------------------------------------cccccccccccccc-------------------------------------------------- : Lupas 14
Lupas 21 : ---------------------------------------------------------------------------------------------------------------- : Lupas 21
Lupas 28 : ---------------------------------------------------------------------------------------------------------------- : Lupas 28
Jnet_25 : --B--BB--B-BBB-BBB-BB------BBBBBB---B---BB--BB-BB--B---B------BBBBBB-BB--BB--B---B-B--BB-BB----BB--BB--BB-BB--B- : Jnet_25
Jnet_5 : ---------B---B-BB----------B--BBB--------B--B---B--B-----------------BB--B---B--------BB-BB--------BB--B--BB---- : Jnet_5
Jnet_0 : --------------------------------------------B---B----------------------------------------BB--------------------- : Jnet_0
Jnet Rel : 8079999999999999997527888630222111378668999999999999999999987337822179999875278877378999998743787328999999987359 : Jnet Rel
Notes
Key:
Colour code for alignment:
Blue - Complete identity at a position
Shades of red - The more red a position is, the higher the level of
conservation of chemical properties of the amino acids
Jnet - Final secondary structure prediction for query
jalign - Jnet alignment prediction
jhmm - Jnet hmm profile prediction
jpssm - Jnet PSIBLAST pssm profile prediction
Lupas - Lupas Coil prediction (window size of 14, 21 and 28)
Note on coiled coil predictions - = less than 50% probability
c = between 50% and 90% probability
C = greater than 90% probability
Jnet_25 - Jnet prediction of burial, less than 25% solvent accesibility
Jnet_5 - Jnet prediction of burial, less than 5% exposure
Jnet_0 - Jnet prediction of burial, 0% exposure
Jnet Rel - Jnet reliability of prediction accuracy, ranges from 0 to 9, bigger is better.