SILENT_MODE BLOCK_FILE jp_QKBALs_.concise.blc MAX_NSEQ 164 MAX_INPUT_LEN 166 OUTPUT_FILE jp_QKBALs_.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 74 153 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 154 74 163 H SPACE SUB_CHARS 1 154 74 163 E SPACE SUB_CHARS 1 154 74 163 - SPACE HELIX 6 157 13 COLOUR_TEXT_REGION 6 157 13 157 50 HELIX 19 157 24 COLOUR_TEXT_REGION 19 157 24 157 50 HELIX 27 157 35 COLOUR_TEXT_REGION 27 157 35 157 50 HELIX 41 157 54 COLOUR_TEXT_REGION 41 157 54 157 50 HELIX 57 157 71 COLOUR_TEXT_REGION 57 157 71 157 50 HELIX 6 162 12 COLOUR_TEXT_REGION 6 162 12 162 50 HELIX 19 162 24 COLOUR_TEXT_REGION 19 162 24 162 50 HELIX 27 162 35 COLOUR_TEXT_REGION 27 162 35 162 50 HELIX 41 162 54 COLOUR_TEXT_REGION 41 162 54 162 50 HELIX 57 162 72 COLOUR_TEXT_REGION 57 162 72 162 50 HELIX 5 163 13 COLOUR_TEXT_REGION 5 163 13 163 50 HELIX 19 163 23 COLOUR_TEXT_REGION 19 163 23 163 50 HELIX 27 163 36 COLOUR_TEXT_REGION 27 163 36 163 50 HELIX 41 163 54 COLOUR_TEXT_REGION 41 163 54 163 50 HELIX 57 163 71 COLOUR_TEXT_REGION 57 163 71 163 50