SILENT_MODE BLOCK_FILE jp_oJDHxXD.concise.blc MAX_NSEQ 905 MAX_INPUT_LEN 907 OUTPUT_FILE jp_oJDHxXD.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 282 894 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 895 282 904 H SPACE SUB_CHARS 1 895 282 904 E SPACE SUB_CHARS 1 895 282 904 - SPACE STRAND 30 898 32 COLOUR_TEXT_REGION 30 898 32 898 51 STRAND 37 898 41 COLOUR_TEXT_REGION 37 898 41 898 51 STRAND 65 898 69 COLOUR_TEXT_REGION 65 898 69 898 51 STRAND 75 898 80 COLOUR_TEXT_REGION 75 898 80 898 51 STRAND 85 898 91 COLOUR_TEXT_REGION 85 898 91 898 51 STRAND 105 898 110 COLOUR_TEXT_REGION 105 898 110 898 51 STRAND 115 898 118 COLOUR_TEXT_REGION 115 898 118 898 51 STRAND 154 898 160 COLOUR_TEXT_REGION 154 898 160 898 51 STRAND 177 898 178 COLOUR_TEXT_REGION 177 898 178 898 51 STRAND 182 898 183 COLOUR_TEXT_REGION 182 898 183 898 51 STRAND 189 898 192 COLOUR_TEXT_REGION 189 898 192 898 51 STRAND 210 898 214 COLOUR_TEXT_REGION 210 898 214 898 51 STRAND 232 898 234 COLOUR_TEXT_REGION 232 898 234 898 51 HELIX 14 898 15 COLOUR_TEXT_REGION 14 898 15 898 50 HELIX 21 898 26 COLOUR_TEXT_REGION 21 898 26 898 50 HELIX 45 898 59 COLOUR_TEXT_REGION 45 898 59 898 50 HELIX 133 898 147 COLOUR_TEXT_REGION 133 898 147 898 50 HELIX 163 898 171 COLOUR_TEXT_REGION 163 898 171 898 50 HELIX 195 898 206 COLOUR_TEXT_REGION 195 898 206 898 50 HELIX 218 898 225 COLOUR_TEXT_REGION 218 898 225 898 50 HELIX 235 898 235 COLOUR_TEXT_REGION 235 898 235 898 50 HELIX 238 898 254 COLOUR_TEXT_REGION 238 898 254 898 50 HELIX 256 898 261 COLOUR_TEXT_REGION 256 898 261 898 50 HELIX 265 898 268 COLOUR_TEXT_REGION 265 898 268 898 50 HELIX 278 898 280 COLOUR_TEXT_REGION 278 898 280 898 50 STRAND 3 903 3 COLOUR_TEXT_REGION 3 903 3 903 51 STRAND 30 903 32 COLOUR_TEXT_REGION 30 903 32 903 51 STRAND 37 903 41 COLOUR_TEXT_REGION 37 903 41 903 51 STRAND 65 903 69 COLOUR_TEXT_REGION 65 903 69 903 51 STRAND 75 903 81 COLOUR_TEXT_REGION 75 903 81 903 51 STRAND 84 903 91 COLOUR_TEXT_REGION 84 903 91 903 51 STRAND 105 903 110 COLOUR_TEXT_REGION 105 903 110 903 51 STRAND 115 903 118 COLOUR_TEXT_REGION 115 903 118 903 51 STRAND 154 903 160 COLOUR_TEXT_REGION 154 903 160 903 51 STRAND 177 903 178 COLOUR_TEXT_REGION 177 903 178 903 51 STRAND 182 903 183 COLOUR_TEXT_REGION 182 903 183 903 51 STRAND 189 903 192 COLOUR_TEXT_REGION 189 903 192 903 51 STRAND 210 903 214 COLOUR_TEXT_REGION 210 903 214 903 51 STRAND 231 903 235 COLOUR_TEXT_REGION 231 903 235 903 51 HELIX 13 903 15 COLOUR_TEXT_REGION 13 903 15 903 50 HELIX 21 903 26 COLOUR_TEXT_REGION 21 903 26 903 50 HELIX 44 903 59 COLOUR_TEXT_REGION 44 903 59 903 50 HELIX 133 903 147 COLOUR_TEXT_REGION 133 903 147 903 50 HELIX 163 903 170 COLOUR_TEXT_REGION 163 903 170 903 50 HELIX 195 903 206 COLOUR_TEXT_REGION 195 903 206 903 50 HELIX 218 903 225 COLOUR_TEXT_REGION 218 903 225 903 50 HELIX 238 903 261 COLOUR_TEXT_REGION 238 903 261 903 50 HELIX 265 903 268 COLOUR_TEXT_REGION 265 903 268 903 50 HELIX 277 903 280 COLOUR_TEXT_REGION 277 903 280 903 50 STRAND 30 904 32 COLOUR_TEXT_REGION 30 904 32 904 51 STRAND 37 904 40 COLOUR_TEXT_REGION 37 904 40 904 51 STRAND 65 904 69 COLOUR_TEXT_REGION 65 904 69 904 51 STRAND 75 904 80 COLOUR_TEXT_REGION 75 904 80 904 51 STRAND 85 904 92 COLOUR_TEXT_REGION 85 904 92 904 51 STRAND 104 904 111 COLOUR_TEXT_REGION 104 904 111 904 51 STRAND 116 904 118 COLOUR_TEXT_REGION 116 904 118 904 51 STRAND 154 904 160 COLOUR_TEXT_REGION 154 904 160 904 51 STRAND 177 904 178 COLOUR_TEXT_REGION 177 904 178 904 51 STRAND 181 904 183 COLOUR_TEXT_REGION 181 904 183 904 51 STRAND 189 904 190 COLOUR_TEXT_REGION 189 904 190 904 51 STRAND 210 904 214 COLOUR_TEXT_REGION 210 904 214 904 51 STRAND 279 904 280 COLOUR_TEXT_REGION 279 904 280 904 51 HELIX 23 904 23 COLOUR_TEXT_REGION 23 904 23 904 50 HELIX 45 904 59 COLOUR_TEXT_REGION 45 904 59 904 50 HELIX 133 904 148 COLOUR_TEXT_REGION 133 904 148 904 50 HELIX 163 904 171 COLOUR_TEXT_REGION 163 904 171 904 50 HELIX 195 904 207 COLOUR_TEXT_REGION 195 904 207 904 50 HELIX 219 904 226 COLOUR_TEXT_REGION 219 904 226 904 50 HELIX 233 904 246 COLOUR_TEXT_REGION 233 904 246 904 50 HELIX 249 904 253 COLOUR_TEXT_REGION 249 904 253 904 50 HELIX 256 904 261 COLOUR_TEXT_REGION 256 904 261 904 50 HELIX 265 904 268 COLOUR_TEXT_REGION 265 904 268 904 50