QUERY               : STLTKELIKDAAEKCCTRNRQECCIEIMKFGTPIRCGYDRDPKLPGYVYKCLQNVLFAKEPKKKINLDDSVCCSVFGNDQEDSGRRCENRCKNLMTSPSIDAATRLDSIKSCSLLDNVLYKCFEKCRSLRKDGIKIEVLQFEEYCEA : QUERY 
UniRef90_A8XVE8     : ASFSNSQIKEAAQKCCTPNRYECCMDMIKFGTPIKCGYERDLKIPALVYNCMQQELFAQEPEKRMNLDDSVCCTVFGQDLNDPNRRCESICKTTMQSPSLDAATKLQKIKDCTLSENVLYQCFTKCQMLRRQDIKIEVLHFNEYCNT : UniRef90_A8XVE8
UniRef90_G0NPP0     : ATFTREQIKKASRKCCTPKRQECCMEMIKFGSPINCGYEKHPKFPKVVYDCLQGQLFPNEPEKRMELEDSGCCSVYHHDQNDPNRRCEHICKTSLTSPALDAATKISRIQSCTLLDNALYGCFEKCQARRRKGQKIEVLQFSEYCN- : UniRef90_G0NPP0
UniRef90_E3M9V5     : ASFTDEKIEAAAAKCCVKK-EECCREVIRFGLPVRCRYEKEKELPRIVYNCLQKELFDKEEEKRVELDDIVCCQVFLKDKFDPKGRCERICKTAMESPSYSETVKLQRIKECTIVENPRFQCFNQCRALRREGINIEVMRQDEYCNT : UniRef90_E3M9V5
UniRef90_H3EIN2     : AAALNKKFSAVAEKCCPAAAFQCCYNAIDFNLRLSCAQIPDVRTDNEMIRCVQTELHGENDTMETGIGHLGCCQTFKNDQTDPRSMCYVTCRFFLHTPSFNSSEKLYMIEECRL-TNPLYTCFNDCRTVHNEN-------------- : UniRef90_H3EIN2
UniRef90_O02422     : --------EVVVALCCSKEYAECCTESVNFAKPLRCGMKLGARIN--VTLCIQKELHG-EYQPMLNLTDTVCCDVFADDDNDEKEYCLTECITVMQIPALRNDRKLKRIKECRR-TNPLYKCFNRCLQWLHSRTEDEAFDFEQEC-- : UniRef90_O02422
UniRef90_E1FTD1     : ---------QIVARCCSKEYAECCTESVDFAKPLRCGMMLGTRID--VTQCIQKKMYGEHHPMLLNLTDALCCDVFADDDNDEKGHCLTECITVMQIPALRNDKKLKRIKGCRR-TNQLYKCFTRCLQWLHNKTEDEVLDFEQEC-- : UniRef90_E1FTD1
UniRef90_H3E5Z9     : AAALEEKISTVAKKCCPAAAFQCCYDAIDFHTRLSCSEIPEEK-RVEAMRCVQTELYGEKDMKWTGIDHLDCCEAFKNDYTDTYGMCYATCKYAMMAPSMKSRAKLHLIEHCR-MTNPLNTCFNQCRIDHNEK-------------- : UniRef90_H3E5Z9
UniRef90_H3FIN9     : SSALDSDVSKVAHKCCPTAAFECCYNAINFHVRLSCSEIPQGGKRNEAMRCIQRELHGEKDVNKTSIDHLDCCDAFDNDFTDPNGYCYEACVFALNAPSRSSKDKLQYIKECRRKNN-LNGCFNQCRAKQND--------------- : UniRef90_H3FIN9
UniRef90_H3FTG2     : AAALEEKIEAVATKCCPKAAFQCCYDAIDFNQRLSC-VDILERKRQETIECIQSELHGENDTMTAGIQHIGCCEAFKDDRTDPRSLCYETCKRMLKAPALKSSVKLFKIEQCR-ITNPLIHCFESCRVEQNLKIS------------ : UniRef90_H3FTG2
UniRef90_A0A016SQJ4 : --------RQISSRCCPHSTRRCCEEVIETRQPLNCSMPLHELIASS--NCIQKEMFGKKSLELARIEDVECCRVFSNESKDADGTCVATCVRALRSPSLRSIDTLKSIKSCR-SDNKDYTCFRRCQSLRSRNSTTESFPYLAVCD- : UniRef90_A0A016SQJ4
UniRef90_U6NYG6     : ---------AIARSCCPYKAVSCCVETIENRLPLNCSLPLESLVSAS--NCIQTTMYGVNSIKRIQIEDIECCQVFSDDFTDNSADCLNTCKRTLRTPSLRLIDKLHSIRNCR-PDNKNYQCFRQCLSLRSRNNSTKKFPYLAVCN- : UniRef90_U6NYG6
UniRef90_H3G087     : ----DKATKDAANKCCPADYMRHCMQAIEFQLRLN---FRNKAAEREATICIQRELYSDDSLNVVSPKTLHCCNVFANDPTDRNNVCFNACQNASLSASIKPTRKLAIIRECR---------------------------------- : UniRef90_H3G087
UniRef90_H3G081     : ----------AVQKCCPPEQKRCCTEAIEFRYRLNC--FNDTRKMIEATMCIQKTMYKEESLDVVSPKTFSCCNVFANDLNDPVGYCHQTCQ------------------------------------------------------- : UniRef90_H3G081

                    : 1---------11--------21--------31--------41--------51--------61--------71--------81--------91--------101-------111-------121-------131-------141---- :
OrigSeq             : STLTKELIKDAAEKCCTRNRQECCIEIMKFGTPIRCGYDRDPKLPGYVYKCLQNVLFAKEPKKKINLDDSVCCSVFGNDQEDSGRRCENRCKNLMTSPSIDAATRLDSIKSCSLLDNVLYKCFEKCRSLRKDGIKIEVLQFEEYCEA : OrigSeq

Jnet                : ----HHHHHHHHH-----HHHHHHHHHHHH------------HHHHHHHHHHHHHH--------E---------------------HHHHHHHHHH------HHHHHHHHH---------HHHHHHHHHHH-----EEE--HHH--- : Jnet
jhmm                : ---HHHHHHHHHH-----HHHHHHHHHHH-------------HHHHHHHHHHHHHH------------------------------HHHHHHHHHH------HHHHHHHHH----------HHHHHHHHHH----EEEE--HH---- : jhmm
jpssm               : ----HHHHHHHHH----HHHHHHHHHHHHH-----------HHHHHHHHHHHHHH--------EE------EEEE----------HHHHHHHHHHH-----HHHHHHHHH---------HHHHHHHHHHHH-----EEEEHHHH--- : jpssm

Lupas 14            : --------------------------------------------------------------------------------------------------------------------------------------------------- : Lupas 14
Lupas 21            : --------------------------------------------------------------------------------------------------------------------------------------------------- : Lupas 21
Lupas 28            : --------------------------------------------------------------------------------------------------------------------------------------------------- : Lupas 28

Jnet_25             : --B----B--BB--BB---BB-BB--BB-B---B-B-B-----B--BBB-BB---BB-------B-B--B-BB-BB-----B----BB-BB--BB-BBBB-----B--B--B----B--B-BB--B------------B-B---B-- : Jnet_25
Jnet_5              : -------B--BB-----------B---B-----B-B-----------B---B-------------------BB-------------B---B--B--------------B--B---------BB--B--------------------- : Jnet_5
Jnet_0              : -----------------------B-----------------------B--------------------------------------B---B-------------------------------------------------------- : Jnet_0
Jnet Rel            : 999056999998605862489999999871166667777641458999999988526777750013677612223157777775006899999875378862799998752557887641189999999852789336511341089 : Jnet Rel

Notes
Key:
Colour code for alignment:
Blue            - Complete identity at a position
Shades of red   - The more red a position is, the higher the level of
                  conservation of chemical properties of the amino acids
Jnet            - Final secondary structure prediction for query
jalign          - Jnet alignment prediction
jhmm            - Jnet hmm profile prediction
jpssm           - Jnet PSIBLAST pssm profile prediction

Lupas           - Lupas Coil prediction (window size of 14, 21 and 28)

Note on coiled coil predictions  - = less than 50% probability
                                 c = between 50% and 90% probability
                                 C = greater than 90% probability

Jnet_25         - Jnet prediction of burial, less than 25% solvent accesibility
Jnet_5          - Jnet prediction of burial, less than 5% exposure
Jnet_0          - Jnet prediction of burial, 0% exposure
Jnet Rel        - Jnet reliability of prediction accuracy, ranges from 0 to 9, bigger is better.