SILENT_MODE BLOCK_FILE jp_tJHKS5z.concise.blc MAX_NSEQ 267 MAX_INPUT_LEN 269 OUTPUT_FILE jp_tJHKS5z.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 81 256 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 257 81 266 H SPACE SUB_CHARS 1 257 81 266 E SPACE SUB_CHARS 1 257 81 266 - SPACE STRAND 6 260 11 COLOUR_TEXT_REGION 6 260 11 260 51 HELIX 27 260 36 COLOUR_TEXT_REGION 27 260 36 260 50 HELIX 38 260 53 COLOUR_TEXT_REGION 38 260 53 260 50 HELIX 62 260 76 COLOUR_TEXT_REGION 62 260 76 260 50 STRAND 6 265 11 COLOUR_TEXT_REGION 6 265 11 265 51 HELIX 27 265 36 COLOUR_TEXT_REGION 27 265 36 265 50 HELIX 38 265 53 COLOUR_TEXT_REGION 38 265 53 265 50 HELIX 62 265 76 COLOUR_TEXT_REGION 62 265 76 265 50 STRAND 6 266 10 COLOUR_TEXT_REGION 6 266 10 266 51 HELIX 11 266 12 COLOUR_TEXT_REGION 11 266 12 266 50 HELIX 27 266 36 COLOUR_TEXT_REGION 27 266 36 266 50 HELIX 38 266 54 COLOUR_TEXT_REGION 38 266 54 266 50 HELIX 62 266 75 COLOUR_TEXT_REGION 62 266 75 266 50