QUERY : AMNTDLKLPAGKTMTIEDVKQLLERYQMALKKTGEQLGWAYEQAAFPYTVRIHESVLYLQGDGRLYKGMAISVRTAGEETFIDIALPPGATHGDKGKANEFSKWLAKTLGGELHLFSGRTMVFG : QUERY
UniRef90_UPI0002D4F941 : ATITFVDGSAVPSATLDELKEQLLHYRHQTSLTGEQLSWDYADAAFPYTIEAKPGWFYLKGTSPLYRHIVFGVGTTKERHFVQVVLPDDATHGDKGKGNELCKYLAKTWKAELKLFNGRIMYYN : UniRef90_UPI0002D4F941
UniRef90_UPI00035FE3C2 : AQSAYIKGSALTSLTLDELKEQLLHYQEQLALTGKQLGWDYAEAGFPYTIETKPEWFYLKGTDARYNYIVLGVGSEREVHYVQVVLPDGATHGDKAKGNEFCKYLAKRWKAELHLFNGRTMFFN : UniRef90_UPI00035FE3C2
UniRef90_I3DYU7 : ATNAYIKLSAKKDITLEEVKELLLYYKNITSKTGDQLDWNYEDAAFPYEIKENEEWFYLFSNQDRYRTIIIGVGTEMEQTYIQITLPESSTFGDKGKANEFCKFLAKKLQGELHLFNGRIMYY- : UniRef90_I3DYU7
UniRef90_UPI00047AE1AA : AANAYIKLSAKEDITTEELKELFLYFKDITGKTGAQIDWQYNDAAFPYEIKEKPEWFYLLSNHDRYNAILLGVGTEREQTYIQITLPENATFGDKGKANEFCRFLAKKLKGELHLFNGRVMYF- : UniRef90_UPI00047AE1AA
UniRef90_S9T1M7 : AFITFVDGSEVASITLDELKGQLLHYREQTQLTGEQLGWDYAEAAFPYTIETKPEWFYLKGSNPLYRHIVFGVGEKEDRRYVQMVLPDDATHGDKAKGNELCKYLAKKWKAELTLFNGRIMYYN : UniRef90_S9T1M7
UniRef90_L0EFA9 : SQSAYIYGSAVEQLTLDGVKEQLQRYREQTALTGRQLGWDYADAAFPYTIETKEGWFYLKGTDSHYRYIVIGVGQDRTVHYVQVVLPDDATHGDKGKANELCKYLAKHLQAELKLFNGRTIYYN : UniRef90_L0EFA9
UniRef90_A0A023CQT1 : ATHAYIKLSKQKTITLEEVKQLFQYYRDILSKTGEQLGWRYEQAAFPYQLVETDEWFYLKGDGHRYRAIIVGVGTESEQSFIQITLPNEATYGDKGKANEFCKFLAKKLEGELHLFNGKVMYF- : UniRef90_A0A023CQT1
UniRef90_UPI00031242D8 : -STAYIKLSNKQEVSLADLKNLFHYYKEITSKTGQQLEWEYEDCAFPYEIKEKYDWFYLKGTKDRYHYILLGVGSEQTQNFIQVALPEGATHGDKGKANEFCKFIARKLNGELHLFNGRIMY-- : UniRef90_UPI00031242D8
UniRef90_F5LCV1 : SQSAFIRFVTGSTMTLDELKGQLEHYREQLSRTGVQLSWEYDSAGFPYTVETKPEWFYLKGTTPRYRSIVLGVGSESLQHYVQIVLPDTATHGDKSKANELGKYLARHWKARLDLFNGRTMYFN : UniRef90_F5LCV1
UniRef90_UPI00037FC82D : SQSAYISLSAATDITLDDVKEHLLRYRAQTALTGKQLGWDYANAAFPYTIEHKPGWFYLKGLKPQYRFILFGVGRKQEVPYIQVVLPEGATHGDKAKANEYCKWLGRQLLAEVKLFNGRIMHYN : UniRef90_UPI00037FC82D
UniRef90_W4RQI5 : SSNAYIKLSSQQAISTDDLKDLFNYYKEITAKTGDQVDWNYENSAFPYDLKEKEDWFYLQSSQDRYNAILIGVGTEREQSYIQITLPPTATAGDKGKANEFSKFIGKKLQGELHLFNGRVMYF- : UniRef90_W4RQI5
UniRef90_UPI00041B1957 : ANNAYIKLSAKQSITLQEVKDLLLYYKDITSKTGDQLAWKYEEASFPYTIEEKSRWFYLKGTDPRYKYIMIGIDEEAQTMYIQVTVPDGATHGDKGKANEFCKFLAKKLSAELHLFNGRIMYY- : UniRef90_UPI00041B1957
UniRef90_UPI00046955C4 : SNSSFIKLSATSQVTLQDVKSKLQHYIDMTTKTGKQLDWGYSEAAFPYSIAEKPEWFYLKGKDKLYKYIVFGVGSEEEQYFIQVVLPEGATHGDKGKANEFCKYLAKEYKAELHLFNGRIMYY- : UniRef90_UPI00046955C4
UniRef90_UPI00047DA9D0 : AKNAFIKLSAKQQVTIDEVKELFYYYKDITSKTGNQVDWQFGNAAFPYEVKEKEEWFYLHSDHEKYFAILIGVDSERVQHYIQVTLPEQSTYGDKGKANEFCKFLAKKMQGELHLFNERVMYY- : UniRef90_UPI00047DA9D0
UniRef90_UPI000410DA27 : SQSAYISLSAADRIALEDVKEHLLHYREQTSLTGQQLDWNYAEAAFPYSIETKERWFYLKGKTPQYRFILFGTGVEAEIPFVHVVLPDGATHGDKSKANEFCKWLGKRLLAEVKLFNGRILSYN : UniRef90_UPI000410DA27
UniRef90_UPI00037A2A5E : SQSAYITFVEGSTVTLEDVKQSLLHYKEQTALTGKQLDWDYAEAAFPYTIETRPQWFYLKGALPRYKYILFGVGSDQERHYIQIVLPEEATHGDKAKGNELCKYIARSNKAQLRMFNGRTFYFN : UniRef90_UPI00037A2A5E
UniRef90_F5L848 : SQSAYIRLVEESTMTLDDVKQKLERYISMTTKTGQQLAWHYEEAAFPYTIEEKSEWLYLKGNNPLYKYIVIGVGSEKEEHYIQVVLPDGATHGDKSKANEFCKYLAKAYQAKLQLFNGRTMYF- : UniRef90_F5L848
UniRef90_UPI000288A3B7 : AQSAYIKGSAVSSLTLEDLEQHLLSYKEQLARTGQQLGWSYENAGFPYSIEKKDRWFYLKGQDSSYRYIVLGLGKEGDVHYVQVVLPDDATHGDKGKANELCRHLGRKLQGELHMFNGRVMYF- : UniRef90_UPI000288A3B7
UniRef90_UPI0002F033C4 : -QSAYIYLSAVQQATLADVKQKLQHYIDMTKKTGQQLGWWYSEAAFPYTIEDAEDWLLLKGQDPLYRSIIIGVGQDGERHYIQVTLPPVATHGDKSKANEFCRFLARAFKGELVLFNGRVQYF- : UniRef90_UPI0002F033C4
UniRef90_UPI00036452A4 : -QDAFIKLSTQQSISLDDVKQLFHYYKTITSQTGHQLGFSYASTAFPYTVDTSDTTLCLKSNHERYHSIYVGIGIENEQFFIQITLPSTATFGDKGKANEFCRFLAKKLEGELQLFNGRTMYF- : UniRef90_UPI00036452A4
UniRef90_UPI00047CB799 : SQSAYIRLVQGSEIDLNGVKEQLTHYRQQVTLTGKQLGWEYEEAAFPYSVETKPDWFYLKGNNPMYKYIVFGTDKKEEDPYIHVVLPDGATHGDKAKANELCKWIGRKLQAEVKMFNGRTIYYN : UniRef90_UPI00047CB799
UniRef90_UPI00047AF8CA : SNHAFIKLSKQQTITLDELKDIFTYYKTITSKTGDQLAWGYGQAAFPYEITPSPDWFYLKGTVPGYKYIVLGVGTEQTDTYIQVTLPEGATHGDKGKANEFVKFLGKKLEAEVQLFNERTMYF- : UniRef90_UPI00047AF8CA
UniRef90_L5MSY6 : -QSAYIYGSTAQSASIDDVKAKFTRYMDMTSKTGEQLGWSYAEAAFPYTIEEKDSWFLLKGKDPMYKSIVVGVGSKEEKHYIQIALPESATHGDKNKANEYCRYLARDYKAELHLFNKRIQYF- : UniRef90_L5MSY6
UniRef90_K6D7M7 : SRTAYIKLSNKQEVTIDDLRDYLNYYQEITSKTGEQLGWNYENSAFPYEIKEREDWFYLKGTSDRYNFILLGVGSEEKQNFIQVALPESANFGDKNKAVEFIKFLGRKLNGEVHLFNGRIMYF- : UniRef90_K6D7M7
UniRef90_UPI0002D6564E : SSHAYIRLSEKESVTTDEVIELLNYYKHITDKTGAQLKWEYEEAAFPYKILEKPEWFYLKSEEPNYNIILLGVGTEYEQTYIQMTLPETSTFGDKGKANEFCKFLAKKLKGELQLFNGRVMYF- : UniRef90_UPI0002D6564E
UniRef90_C2WBA3 : -QHAFIKLVPKQTVSLEDVKQIFRHYKTITSQTGVQVSYAYTNVAFPYEIDTSDTTLELKSNHDRYNSIYIGVGVENEQAFIQVSLPSTATFGDKGKANEFCRFLAKKLEGKLRLFNGRTMYF- : UniRef90_C2WBA3
UniRef90_E0I3L5 : SKTAYIRLVQGSTLTLDDLQLSLHAYQDAVRRTGFQLDWNYEEAAFPYSIEPVPQWLYLRGKASRYRHIAIGVGTANSTPYIQVVLPDGSTHADHAKANELCRFIAERLKAELQLFNGRIMYYN : UniRef90_E0I3L5
UniRef90_V6MBW3 : -QSAYIYFVEGSTATLEDVKAKFNRYIEMTKKTGEQLGWSYADSAFPYELEERPEWFLLRGKDPNYKAIVVGVGSKKERQYVQVSLPESATHGDKGKANEFCRYLARDYKGELHLFNRRVQYF- : UniRef90_V6MBW3
UniRef90_UPI000479C85A : AGNAYIKLSAKQKVTIEEVKELFHEYKKNTTKTGNQIGWEYGESAFPYEMKETTEWFYLHSNDERYYAILVGVDQETEQTYIQVTLPDQSTYGDKGKANEFCKYLAKKLQGELHLFNERIMYY- : UniRef90_UPI000479C85A
UniRef90_UPI00041C9D64 : SENAYIKLVEGQTLTLGDLKELFHYYKQITSKTGDQLNWDYSVKAFPYDIKEAHDRFYLSSSHDKYNHIILGIESEKIQSYIQVTLPESSTYGDKGKANEFCKYLAKKLKGELHLFNGRVMYY- : UniRef90_UPI00041C9D64
UniRef90_F5SDA9 : -KSAYIKL--ARQVSLDEVKEKLDHLIEDTSRTGEQLGWDYASAAFPYSVEEKNHWLLLRGKESRYKYLLIGIGSDKEPPSIQVVVPDGATHGDHAKANEICRFLAKSFAAELHLFNGRIMYYN : UniRef90_F5SDA9
UniRef90_UPI0001E8989C : ASSAYINLVPKSTLTVEHVKELLNYYKDITSKTGKQLGWEYSQAAFPYELKEKPQWFYLKGTEDRYKMILIGVGTTEPLSYIQVTLHDQSTHGDKAKANELCKFFAKKLEAELKLFTGSIMYY- : UniRef90_UPI0001E8989C
UniRef90_M8DLR4 : -QSAYIYLVDGSTATLDEVKAKLLRYVDMTKKTGEQLGWSYADAAFPYVIDEKDSWLLLRGKDPTHKAIIIGVGKREEHSYIQVSLPDSATHGDKSKANEFCRYLARNFKAELHLFNNRIQYF- : UniRef90_M8DLR4
UniRef90_V9W900 : SQSAFIYFSAVSSLSPEELKEKLLYYLDQLTKTAQQLNWDYADAGFPYTIETKDQWFYLKGTNFLYKHIVFGVGREEDRSFVQIVLPDDCTPGDKSKGNEFGKFLARHLKAQLKLFNGRTMHF- : UniRef90_V9W900
UniRef90_U1WPM6 : AYIKFVEGSTTKQVTLDEVKQQFKRYTEMTSKTGQQLDWNYAHSAFPYTMEEKGQWFYLKGTDELYRYILVGVGTTEEENYIQITLSPESTHGDKGKANEFCKYLAKEYKAELHLFNGRIMYYN : UniRef90_U1WPM6
UniRef90_U5L8K2 : SSSAYIKLSSQETITIQEVKDLLEYYKAITAKTGDQVDWGYSKAAFPYEIKEYTQRLWLQSLDDRYNTILIGVGTERIQSYIQLTLPENAAMGDKSKANEFCKFLAKKLQAELQLFNGRIMYFN : UniRef90_U5L8K2
UniRef90_N0AWT0 : -QSAYIKLVPKQNVTTDDIKSYFNYYKDITAKTGDLIDWKYDGSAFPYEIKEQENWFYLFSSKDRYHAILIGIGTETEQTYIQITLTENSTVGDKGKANEFCKFLAKKLQGELHLFNGRVMYF- : UniRef90_N0AWT0
UniRef90_A7GRZ5 : -QHAFIKLSKKQSVSLDDIKEFFQYYKTITSQTGTQIHYAYADFAFPYEIDTSDSTLELKSNHERYNCIYVGVDSENDQTFIQISLPSTATFGDKGKANEFFRFLAKKLEGELQLFNGRTMYF- : UniRef90_A7GRZ5
UniRef90_UPI0003B55E4E : -KSAYIKLSAQTEVTLADVKELLVRYQHMTSLTGQQLDWDYQAAAFPYTIEEQEQYLVLKGTEPLYRGLVIGVSQEEDTPYVQLVLPEQATHGDLAKGNEFSKYIAKQLKAELHLFNGRIIYYN : UniRef90_UPI0003B55E4E
UniRef90_I8AHQ7 : -ATSYIKLSTQQTISLADVVRLFRYYQEITEKTGEQLDWAYENAAFPYEVHEKEDWLYLKGDPDQYRYLLVAVDCEREESYVQLTIPSLATHGDKAKANEFAKFLAKQLQGELHLFNGRIMHF- : UniRef90_I8AHQ7
UniRef90_C6D4Y6 : SQSAFIKLVQGSAVSELLLEGLKEHYREQTALTGTQLDWDYANAAFPYTIESKDRWFYLQGTNPGYKYIVFGNGSEGPST-IQIVLPDGSTHGDKAKANELCKYLAKQLLAELTMFNGRTIYYN : UniRef90_C6D4Y6
UniRef90_UPI0002885FED : -ENAYIKLVPAQNIALDDVKNLFNYYKEITSKTGRQLDWNYDDAAFPYQIKEENNWFYLKSDHQKYNAIVVGVDQEVSQSYIQVTLPGNSTAGDKGKANEFCKFLAKKLEGELHLF-------- : UniRef90_UPI0002885FED
UniRef90_UPI00031F9254 : -ESAYIKLSTKQIITLDEIKDILHYYKEITSKTGTQLDWDYGDYAFPYEIKETEEWFYLSSTKDRYNIIIMAVGQERIQSYIQVSLVNSSTYGDKSKANEFCKFISKKLKGELHLFNEKIIY-- : UniRef90_UPI00031F9254
UniRef90_M1Z308 : -QSAYIKISKKERLTLEELKGAIEHYIEMTTKTGEQLDWGYEKAAFPYTMEMRKHWFYLKGKNPLYRVILVGLGTEDGEDVVQITLPDPSTHGDKGKANELSRYLAKHFKAELTLFNGRVQSF- : UniRef90_M1Z308
UniRef90_U4WWF7 : -QSAYVYLSIASTVTLEDVKTFLQKYRKKTSKTGQQLDWNYTDASFPYHIEEKDTFFILKGKDNLYKYVIIGVGTNQERAFIQVSIPDTATQNDKSKGNEYCRYLAREVKGELHLFNGRIQYF- : UniRef90_U4WWF7
UniRef90_B7GIA6 : AHTATIELVPAETVTLEQCKQLLEQFRDIARKTGEQLAWDYAESAFPYDIVIEEDRIVLVGKNDRYHMIECRV----HERAVEFVLPKQATHGDKGKANELCKFFAKRMAGKLHLFNGRVMYY- : UniRef90_B7GIA6
UniRef90_F8F949 : AQSAYIKGSARSTLTLDELKAQLEHYRGQLAQTGRQLGWEYDDAGFPYTIEEKNRWFYLKGKNPLYKYIVMGIGSETERHYVQVVLPDGATHGDKSKGNEFCKYFGRLWKAELHLFNGRTMYFN : UniRef90_F8F949
UniRef90_UPI0003449D3E : SSHALIQIPPTEPMTVELVKSQLERYQHMTIKTGNQLDWEYKEAAFPYKIVPLEDAFYLKGMNPLYRYIVFAIENEATQSIIHVYLVDSSTHGDKGKAIEFCKFLGKQFKGAVHLYNGRVLRY- : UniRef90_UPI0003449D3E
: 1---------11--------21--------31--------41--------51--------61--------71--------81--------91--------101-------111-------121- :
OrigSeq : AMNTDLKLPAGKTMTIEDVKQLLERYQMALKKTGEQLGWAYEQAAFPYTVRIHESVLYLQGDGRLYKGMAISVRTAGEETFIDIALPPGATHGDKGKANEFSKWLAKTLGGELHLFSGRTMVFG : OrigSeq
Jnet : ----EEE-------HHHHHHHHHHHHHHHHHHHHHH------------EEEEE--EEEEE-----EEEEEEEEE------EEEEEE----------HHHHHHHHHHHHHHHEEEE----EEEE- : Jnet
jhmm : ----EEEE-------HHHHHHHHHHHHHHHHHHHHH----HHH-----EEEEE--EEEEE-----EEEEEEEEE------EEEEEE--------HHHHHHHHHHHHHHHHEEEEE----EEEE- : jhmm
jpssm : ----EEE-------HHHHHHHHHHHHHHHHHHHHHHH----------EEEEE---EEEEEE----EEEEEEEE------EEEEEEE-----------HHHHHHHHHHHHHHHEEE----EEEE- : jpssm
Lupas 14 : ---------------------------------------------------------------------------------------------------------------------------- : Lupas 14
Lupas 21 : ---------------ccccccccccccccccccccc---------------------------------------------------------------------------------------- : Lupas 21
Lupas 28 : ---------------cccccccccccccccccccccccccccc--------------------------------------------------------------------------------- : Lupas 28
Jnet_25 : ---B-B-B-----BBB--B--BB--B--BB--BB-BB-B-B--B-BBB-B-----BBBB-B----B-BBBBBB-------BBBBBBB--BB-BB-B-BBBBB-BBB--B---B-BBBBBBBBB- : Jnet_25
Jnet_5 : ------------------B---B--B---B---B----------------------B-B--------BBBBBB--------B-B-B-----------B--BB--BB------B----------- : Jnet_5
Jnet_0 : ------------------B-------------------------------------------------B-BB-----------B-------------B---B---------------------- : Jnet_0
Jnet Rel : 9984340277765328999999999999999986751367333777517885086589971688707898886278886168887436777777323789999998887621045278558837 : Jnet Rel
Notes
Key:
Colour code for alignment:
Blue - Complete identity at a position
Shades of red - The more red a position is, the higher the level of
conservation of chemical properties of the amino acids
Jnet - Final secondary structure prediction for query
jalign - Jnet alignment prediction
jhmm - Jnet hmm profile prediction
jpssm - Jnet PSIBLAST pssm profile prediction
Lupas - Lupas Coil prediction (window size of 14, 21 and 28)
Note on coiled coil predictions - = less than 50% probability
c = between 50% and 90% probability
C = greater than 90% probability
Jnet_25 - Jnet prediction of burial, less than 25% solvent accesibility
Jnet_5 - Jnet prediction of burial, less than 5% exposure
Jnet_0 - Jnet prediction of burial, 0% exposure
Jnet Rel - Jnet reliability of prediction accuracy, ranges from 0 to 9, bigger is better.