SILENT_MODE BLOCK_FILE jp_vF4kz0S.concise.blc MAX_NSEQ 440 MAX_INPUT_LEN 442 OUTPUT_FILE jp_vF4kz0S.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 304 429 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 430 304 439 H SPACE SUB_CHARS 1 430 304 439 E SPACE SUB_CHARS 1 430 304 439 - SPACE STRAND 61 433 64 COLOUR_TEXT_REGION 61 433 64 433 51 STRAND 207 433 207 COLOUR_TEXT_REGION 207 433 207 433 51 HELIX 19 433 32 COLOUR_TEXT_REGION 19 433 32 433 50 HELIX 37 433 47 COLOUR_TEXT_REGION 37 433 47 433 50 HELIX 93 433 105 COLOUR_TEXT_REGION 93 433 105 433 50 HELIX 122 433 133 COLOUR_TEXT_REGION 122 433 133 433 50 HELIX 136 433 143 COLOUR_TEXT_REGION 136 433 143 433 50 HELIX 156 433 165 COLOUR_TEXT_REGION 156 433 165 433 50 HELIX 184 433 188 COLOUR_TEXT_REGION 184 433 188 433 50 HELIX 215 433 225 COLOUR_TEXT_REGION 215 433 225 433 50 HELIX 229 433 243 COLOUR_TEXT_REGION 229 433 243 433 50 HELIX 250 433 255 COLOUR_TEXT_REGION 250 433 255 433 50 HELIX 276 433 288 COLOUR_TEXT_REGION 276 433 288 433 50 STRAND 64 438 65 COLOUR_TEXT_REGION 64 438 65 438 51 STRAND 242 438 243 COLOUR_TEXT_REGION 242 438 243 438 51 HELIX 20 438 32 COLOUR_TEXT_REGION 20 438 32 438 50 HELIX 37 438 47 COLOUR_TEXT_REGION 37 438 47 438 50 HELIX 93 438 105 COLOUR_TEXT_REGION 93 438 105 438 50 HELIX 122 438 133 COLOUR_TEXT_REGION 122 438 133 438 50 HELIX 136 438 143 COLOUR_TEXT_REGION 136 438 143 438 50 HELIX 156 438 165 COLOUR_TEXT_REGION 156 438 165 438 50 HELIX 184 438 188 COLOUR_TEXT_REGION 184 438 188 438 50 HELIX 215 438 225 COLOUR_TEXT_REGION 215 438 225 438 50 HELIX 229 438 234 COLOUR_TEXT_REGION 229 438 234 438 50 HELIX 250 438 255 COLOUR_TEXT_REGION 250 438 255 438 50 HELIX 276 438 288 COLOUR_TEXT_REGION 276 438 288 438 50 STRAND 59 439 64 COLOUR_TEXT_REGION 59 439 64 439 51 STRAND 206 439 207 COLOUR_TEXT_REGION 206 439 207 439 51 STRAND 292 439 292 COLOUR_TEXT_REGION 292 439 292 439 51 HELIX 10 439 13 COLOUR_TEXT_REGION 10 439 13 439 50 HELIX 18 439 32 COLOUR_TEXT_REGION 18 439 32 439 50 HELIX 38 439 47 COLOUR_TEXT_REGION 38 439 47 439 50 HELIX 87 439 89 COLOUR_TEXT_REGION 87 439 89 439 50 HELIX 93 439 104 COLOUR_TEXT_REGION 93 439 104 439 50 HELIX 123 439 132 COLOUR_TEXT_REGION 123 439 132 439 50 HELIX 138 439 142 COLOUR_TEXT_REGION 138 439 142 439 50 HELIX 156 439 165 COLOUR_TEXT_REGION 156 439 165 439 50 HELIX 184 439 188 COLOUR_TEXT_REGION 184 439 188 439 50 HELIX 215 439 226 COLOUR_TEXT_REGION 215 439 226 439 50 HELIX 229 439 244 COLOUR_TEXT_REGION 229 439 244 439 50 HELIX 250 439 255 COLOUR_TEXT_REGION 250 439 255 439 50 HELIX 276 439 288 COLOUR_TEXT_REGION 276 439 288 439 50