SILENT_MODE BLOCK_FILE jp_Gki3kVY.concise.blc MAX_NSEQ 884 MAX_INPUT_LEN 886 OUTPUT_FILE jp_Gki3kVY.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 77 873 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 874 77 883 H SPACE SUB_CHARS 1 874 77 883 E SPACE SUB_CHARS 1 874 77 883 - SPACE HELIX 3 877 15 COLOUR_TEXT_REGION 3 877 15 877 50 HELIX 29 877 30 COLOUR_TEXT_REGION 29 877 30 877 50 HELIX 36 877 49 COLOUR_TEXT_REGION 36 877 49 877 50 HELIX 56 877 58 COLOUR_TEXT_REGION 56 877 58 877 50 HELIX 65 877 74 COLOUR_TEXT_REGION 65 877 74 877 50 HELIX 3 882 15 COLOUR_TEXT_REGION 3 882 15 882 50 HELIX 36 882 49 COLOUR_TEXT_REGION 36 882 49 882 50 HELIX 56 882 59 COLOUR_TEXT_REGION 56 882 59 882 50 HELIX 65 882 75 COLOUR_TEXT_REGION 65 882 75 882 50 HELIX 2 883 15 COLOUR_TEXT_REGION 2 883 15 883 50 HELIX 29 883 30 COLOUR_TEXT_REGION 29 883 30 883 50 HELIX 38 883 49 COLOUR_TEXT_REGION 38 883 49 883 50 HELIX 56 883 57 COLOUR_TEXT_REGION 56 883 57 883 50 HELIX 65 883 74 COLOUR_TEXT_REGION 65 883 74 883 50