SILENT_MODE
BLOCK_FILE jp_G3QCzvX.concise.blc
MAX_NSEQ 925
MAX_INPUT_LEN 927
OUTPUT_FILE jp_G3QCzvX.concise.ps
PORTRAIT
POINTSIZE 8
IDENT_WIDTH 12
X_OFFSET 2
Y_OFFSET 2
DEFINE_FONT 0 Helvetica		DEFAULT 
DEFINE_FONT 1 Helvetica		REL		0.75   
DEFINE_FONT 7 Helvetica		REL		0.6
DEFINE_FONT 3 Helvetica-Bold	DEFAULT    
DEFINE_FONT 4 Times-Bold    	DEFAULT   
DEFINE_FONT 5 Helvetica-BoldOblique	DEFAULT 
#
DEFINE_COLOUR 3  1 0.62 0.67	# Turquiose
DEFINE_COLOUR 4  1 1 0		# Yellow
DEFINE_COLOUR 5  1 0 0		# Red
DEFINE_COLOUR 7  1 0 1		# Purple
DEFINE_COLOUR 8  0 0 1		# Blue
DEFINE_COLOUR 9  0 1 0		# Green
DEFINE_COLOUR 10 0.41 0.64 1.00	# Pale blue 
DEFINE_COLOUR 11 0.41 0.82 0.67	# Pale green 
DEFINE_COLOUR 50 0.69 0.18 0.37	# Pink (helix)
DEFINE_COLOUR 51 1.00 0.89 0.00	# Gold (strand)
NUMBER_INT 10
SETUP
#
# Highlight specific residues.
# Avoid highlighting Lupas 'C' predictions by
# limiting the highlighting to the alignments 
Scol_CHARS	C 1 1 153 914   4
Ccol_CHARS	H ALL    5
Ccol_CHARS	P ALL    8
SURROUND_CHARS LIV   ALL
#
# Replace known structure types with whitespace
SUB_CHARS 1 915 153 924 H SPACE
SUB_CHARS 1 915 153 924 E SPACE
SUB_CHARS 1 915 153 924 - SPACE
STRAND 11 918 16
COLOUR_TEXT_REGION 11 918 16 918 51
STRAND 21 918 28
COLOUR_TEXT_REGION 21 918 28 918 51
STRAND 36 918 46
COLOUR_TEXT_REGION 36 918 46 918 51
STRAND 64 918 68
COLOUR_TEXT_REGION 64 918 68 918 51
STRAND 72 918 78
COLOUR_TEXT_REGION 72 918 78 918 51
HELIX 51 918 60
COLOUR_TEXT_REGION 51 918 60 918 50
HELIX 82 918 89
COLOUR_TEXT_REGION 82 918 89 918 50
HELIX 98 918 112
COLOUR_TEXT_REGION 98 918 112 918 50
HELIX 118 918 132
COLOUR_TEXT_REGION 118 918 132 918 50
HELIX 144 918 151
COLOUR_TEXT_REGION 144 918 151 918 50
STRAND 10 923 16
COLOUR_TEXT_REGION 10 923 16 923 51
STRAND 21 923 28
COLOUR_TEXT_REGION 21 923 28 923 51
STRAND 36 923 46
COLOUR_TEXT_REGION 36 923 46 923 51
STRAND 64 923 68
COLOUR_TEXT_REGION 64 923 68 923 51
STRAND 72 923 78
COLOUR_TEXT_REGION 72 923 78 923 51
STRAND 141 923 142
COLOUR_TEXT_REGION 141 923 142 923 51
HELIX 51 923 60
COLOUR_TEXT_REGION 51 923 60 923 50
HELIX 83 923 89
COLOUR_TEXT_REGION 83 923 89 923 50
HELIX 99 923 112
COLOUR_TEXT_REGION 99 923 112 923 50
HELIX 118 923 132
COLOUR_TEXT_REGION 118 923 132 923 50
HELIX 144 923 151
COLOUR_TEXT_REGION 144 923 151 923 50
STRAND 13 924 16
COLOUR_TEXT_REGION 13 924 16 924 51
STRAND 21 924 28
COLOUR_TEXT_REGION 21 924 28 924 51
STRAND 36 924 47
COLOUR_TEXT_REGION 36 924 47 924 51
STRAND 64 924 68
COLOUR_TEXT_REGION 64 924 68 924 51
STRAND 72 924 78
COLOUR_TEXT_REGION 72 924 78 924 51
HELIX 8 924 12
COLOUR_TEXT_REGION 8 924 12 924 50
HELIX 50 924 60
COLOUR_TEXT_REGION 50 924 60 924 50
HELIX 82 924 90
COLOUR_TEXT_REGION 82 924 90 924 50
HELIX 98 924 112
COLOUR_TEXT_REGION 98 924 112 924 50
HELIX 118 924 133
COLOUR_TEXT_REGION 118 924 133 924 50
HELIX 143 924 151
COLOUR_TEXT_REGION 143 924 151 924 50