SILENT_MODE BLOCK_FILE jp_pteG5cI.concise.blc MAX_NSEQ 849 MAX_INPUT_LEN 851 OUTPUT_FILE jp_pteG5cI.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 142 838 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 839 142 848 H SPACE SUB_CHARS 1 839 142 848 E SPACE SUB_CHARS 1 839 142 848 - SPACE STRAND 5 842 10 COLOUR_TEXT_REGION 5 842 10 842 51 STRAND 16 842 23 COLOUR_TEXT_REGION 16 842 23 842 51 STRAND 130 842 140 COLOUR_TEXT_REGION 130 842 140 842 51 HELIX 33 842 48 COLOUR_TEXT_REGION 33 842 48 842 50 HELIX 61 842 77 COLOUR_TEXT_REGION 61 842 77 842 50 HELIX 82 842 99 COLOUR_TEXT_REGION 82 842 99 842 50 HELIX 114 842 125 COLOUR_TEXT_REGION 114 842 125 842 50 STRAND 5 847 10 COLOUR_TEXT_REGION 5 847 10 847 51 STRAND 16 847 23 COLOUR_TEXT_REGION 16 847 23 847 51 STRAND 131 847 140 COLOUR_TEXT_REGION 131 847 140 847 51 HELIX 33 847 47 COLOUR_TEXT_REGION 33 847 47 847 50 HELIX 61 847 77 COLOUR_TEXT_REGION 61 847 77 847 50 HELIX 82 847 99 COLOUR_TEXT_REGION 82 847 99 847 50 HELIX 113 847 125 COLOUR_TEXT_REGION 113 847 125 847 50 STRAND 5 848 10 COLOUR_TEXT_REGION 5 848 10 848 51 STRAND 16 848 23 COLOUR_TEXT_REGION 16 848 23 848 51 STRAND 130 848 139 COLOUR_TEXT_REGION 130 848 139 848 51 HELIX 32 848 48 COLOUR_TEXT_REGION 32 848 48 848 50 HELIX 61 848 76 COLOUR_TEXT_REGION 61 848 76 848 50 HELIX 82 848 101 COLOUR_TEXT_REGION 82 848 101 848 50 HELIX 114 848 125 COLOUR_TEXT_REGION 114 848 125 848 50