SILENT_MODE BLOCK_FILE jp_pOXPmpY.concise.blc MAX_NSEQ 1059 MAX_INPUT_LEN 1061 OUTPUT_FILE jp_pOXPmpY.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 79 1048 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 1049 79 1058 H SPACE SUB_CHARS 1 1049 79 1058 E SPACE SUB_CHARS 1 1049 79 1058 - SPACE STRAND 3 1052 8 COLOUR_TEXT_REGION 3 1052 8 1052 51 STRAND 18 1052 23 COLOUR_TEXT_REGION 18 1052 23 1052 51 STRAND 28 1052 34 COLOUR_TEXT_REGION 28 1052 34 1052 51 STRAND 39 1052 43 COLOUR_TEXT_REGION 39 1052 43 1052 51 STRAND 50 1052 56 COLOUR_TEXT_REGION 50 1052 56 1052 51 STRAND 63 1052 68 COLOUR_TEXT_REGION 63 1052 68 1052 51 STRAND 73 1052 78 COLOUR_TEXT_REGION 73 1052 78 1052 51 STRAND 3 1057 9 COLOUR_TEXT_REGION 3 1057 9 1057 51 STRAND 18 1057 23 COLOUR_TEXT_REGION 18 1057 23 1057 51 STRAND 28 1057 34 COLOUR_TEXT_REGION 28 1057 34 1057 51 STRAND 39 1057 43 COLOUR_TEXT_REGION 39 1057 43 1057 51 STRAND 50 1057 56 COLOUR_TEXT_REGION 50 1057 56 1057 51 STRAND 63 1057 68 COLOUR_TEXT_REGION 63 1057 68 1057 51 STRAND 73 1057 78 COLOUR_TEXT_REGION 73 1057 78 1057 51 STRAND 4 1058 7 COLOUR_TEXT_REGION 4 1058 7 1058 51 STRAND 18 1058 24 COLOUR_TEXT_REGION 18 1058 24 1058 51 STRAND 28 1058 34 COLOUR_TEXT_REGION 28 1058 34 1058 51 STRAND 40 1058 43 COLOUR_TEXT_REGION 40 1058 43 1058 51 STRAND 50 1058 56 COLOUR_TEXT_REGION 50 1058 56 1058 51 STRAND 66 1058 67 COLOUR_TEXT_REGION 66 1058 67 1058 51 STRAND 72 1058 78 COLOUR_TEXT_REGION 72 1058 78 1058 51 HELIX 63 1058 65 COLOUR_TEXT_REGION 63 1058 65 1058 50