SILENT_MODE BLOCK_FILE jp_1sFquS3.concise.blc MAX_NSEQ 736 MAX_INPUT_LEN 738 OUTPUT_FILE jp_1sFquS3.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 88 725 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 726 88 735 H SPACE SUB_CHARS 1 726 88 735 E SPACE SUB_CHARS 1 726 88 735 - SPACE STRAND 3 729 9 COLOUR_TEXT_REGION 3 729 9 729 51 STRAND 33 729 40 COLOUR_TEXT_REGION 33 729 40 729 51 STRAND 67 729 68 COLOUR_TEXT_REGION 67 729 68 729 51 STRAND 78 729 85 COLOUR_TEXT_REGION 78 729 85 729 51 HELIX 17 729 29 COLOUR_TEXT_REGION 17 729 29 729 50 HELIX 48 729 63 COLOUR_TEXT_REGION 48 729 63 729 50 STRAND 2 734 9 COLOUR_TEXT_REGION 2 734 9 734 51 STRAND 33 734 40 COLOUR_TEXT_REGION 33 734 40 734 51 STRAND 67 734 68 COLOUR_TEXT_REGION 67 734 68 734 51 STRAND 78 734 85 COLOUR_TEXT_REGION 78 734 85 734 51 HELIX 17 734 29 COLOUR_TEXT_REGION 17 734 29 734 50 HELIX 48 734 62 COLOUR_TEXT_REGION 48 734 62 734 50 STRAND 3 735 10 COLOUR_TEXT_REGION 3 735 10 735 51 STRAND 34 735 41 COLOUR_TEXT_REGION 34 735 41 735 51 STRAND 68 735 68 COLOUR_TEXT_REGION 68 735 68 735 51 STRAND 73 735 74 COLOUR_TEXT_REGION 73 735 74 735 51 STRAND 78 735 85 COLOUR_TEXT_REGION 78 735 85 735 51 HELIX 17 735 29 COLOUR_TEXT_REGION 17 735 29 735 50 HELIX 49 735 63 COLOUR_TEXT_REGION 49 735 63 735 50