SILENT_MODE BLOCK_FILE jp_QKMSluB.concise.blc MAX_NSEQ 642 MAX_INPUT_LEN 644 OUTPUT_FILE jp_QKMSluB.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 156 631 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 632 156 641 H SPACE SUB_CHARS 1 632 156 641 E SPACE SUB_CHARS 1 632 156 641 - SPACE STRAND 11 635 20 COLOUR_TEXT_REGION 11 635 20 635 51 STRAND 26 635 34 COLOUR_TEXT_REGION 26 635 34 635 51 STRAND 49 635 55 COLOUR_TEXT_REGION 49 635 55 635 51 STRAND 64 635 70 COLOUR_TEXT_REGION 64 635 70 635 51 STRAND 76 635 84 COLOUR_TEXT_REGION 76 635 84 635 51 STRAND 93 635 100 COLOUR_TEXT_REGION 93 635 100 635 51 STRAND 110 635 117 COLOUR_TEXT_REGION 110 635 117 635 51 STRAND 143 635 143 COLOUR_TEXT_REGION 143 635 143 635 51 HELIX 125 635 132 COLOUR_TEXT_REGION 125 635 132 635 50 STRAND 11 640 20 COLOUR_TEXT_REGION 11 640 20 640 51 STRAND 26 640 33 COLOUR_TEXT_REGION 26 640 33 640 51 STRAND 49 640 55 COLOUR_TEXT_REGION 49 640 55 640 51 STRAND 63 640 69 COLOUR_TEXT_REGION 63 640 69 640 51 STRAND 80 640 84 COLOUR_TEXT_REGION 80 640 84 640 51 STRAND 94 640 101 COLOUR_TEXT_REGION 94 640 101 640 51 STRAND 110 640 117 COLOUR_TEXT_REGION 110 640 117 640 51 STRAND 152 640 154 COLOUR_TEXT_REGION 152 640 154 640 51 HELIX 125 640 131 COLOUR_TEXT_REGION 125 640 131 640 50 STRAND 10 641 21 COLOUR_TEXT_REGION 10 641 21 641 51 STRAND 26 641 34 COLOUR_TEXT_REGION 26 641 34 641 51 STRAND 49 641 54 COLOUR_TEXT_REGION 49 641 54 641 51 STRAND 64 641 70 COLOUR_TEXT_REGION 64 641 70 641 51 STRAND 76 641 85 COLOUR_TEXT_REGION 76 641 85 641 51 STRAND 93 641 99 COLOUR_TEXT_REGION 93 641 99 641 51 STRAND 111 641 116 COLOUR_TEXT_REGION 111 641 116 641 51 STRAND 139 641 139 COLOUR_TEXT_REGION 139 641 139 641 51 STRAND 143 641 144 COLOUR_TEXT_REGION 143 641 144 641 51 HELIX 124 641 132 COLOUR_TEXT_REGION 124 641 132 641 50