SILENT_MODE BLOCK_FILE jp_nFGY7Yr.concise.blc MAX_NSEQ 640 MAX_INPUT_LEN 642 OUTPUT_FILE jp_nFGY7Yr.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 131 629 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 630 131 639 H SPACE SUB_CHARS 1 630 131 639 E SPACE SUB_CHARS 1 630 131 639 - SPACE STRAND 4 633 12 COLOUR_TEXT_REGION 4 633 12 633 51 STRAND 30 633 32 COLOUR_TEXT_REGION 30 633 32 633 51 STRAND 55 633 64 COLOUR_TEXT_REGION 55 633 64 633 51 STRAND 70 633 73 COLOUR_TEXT_REGION 70 633 73 633 51 STRAND 77 633 79 COLOUR_TEXT_REGION 77 633 79 633 51 STRAND 102 633 106 COLOUR_TEXT_REGION 102 633 106 633 51 STRAND 111 633 120 COLOUR_TEXT_REGION 111 633 120 633 51 HELIX 19 633 25 COLOUR_TEXT_REGION 19 633 25 633 50 STRAND 4 638 12 COLOUR_TEXT_REGION 4 638 12 638 51 STRAND 55 638 64 COLOUR_TEXT_REGION 55 638 64 638 51 STRAND 70 638 73 COLOUR_TEXT_REGION 70 638 73 638 51 STRAND 77 638 79 COLOUR_TEXT_REGION 77 638 79 638 51 STRAND 102 638 106 COLOUR_TEXT_REGION 102 638 106 638 51 STRAND 111 638 119 COLOUR_TEXT_REGION 111 638 119 638 51 HELIX 20 638 24 COLOUR_TEXT_REGION 20 638 24 638 50 STRAND 3 639 12 COLOUR_TEXT_REGION 3 639 12 639 51 STRAND 29 639 33 COLOUR_TEXT_REGION 29 639 33 639 51 STRAND 55 639 64 COLOUR_TEXT_REGION 55 639 64 639 51 STRAND 70 639 73 COLOUR_TEXT_REGION 70 639 73 639 51 STRAND 77 639 79 COLOUR_TEXT_REGION 77 639 79 639 51 STRAND 102 639 106 COLOUR_TEXT_REGION 102 639 106 639 51 STRAND 111 639 120 COLOUR_TEXT_REGION 111 639 120 639 51 HELIX 18 639 25 COLOUR_TEXT_REGION 18 639 25 639 50