QUERY : ACAADEPVTVLTVILDADLTKMTPKQRIDLLNRMQSFSEVELHNMKLVPVVNNRLFDMSAFMAGPGNAKKVVENGALLSWKLGCSLNQNSVPDIRGVETPAREGAMSAQLGYPVVGWHIANKKPT : QUERY
UniRef90_W5N7A6 : -CGNEDPVTVLTVILDADLTKMTSLQRVELLSKMKKFSEVSLQHMKLLPVVNNRLFDMSAFMAGPGNAKKVVENGALLSWKLGCALDQSSVPDISSVQVPAKEGTMSAQLGYPVVGWHIANKKP- : UniRef90_W5N7A6
UniRef90_H2M1V5 : TCMSEEPVTVLTVILDADLTKMVAKQRVNLLSVMKKFSHVPLEHMRVVPVVNNRLFDMTAFMAGPGNAKKVIENGALLSWKVGCSLDHDSIPDISSVQYSAKDGTMSAKLGYPVVGWHIVNKK-- : UniRef90_H2M1V5
UniRef90_W5L657 : -CSSGQPITVLTIILDADLIKMNSRERLALLQKMSHFASVPPELMRVMPVINNRFFDMTAFMAGPGNAKKVVENGALLSWKLGCALDQSNLPDISRVQLPAKDGTMSALLGYPVVGWYIVNKKP- : UniRef90_W5L657
UniRef90_S4RZE5 : GCGPEEAVTVLTIIIDADLTKMNPGQRLQLLKKMEAFADVDVDKIKLMPVINNRLFDMSAFMAGPGNAKKVIENGALLSWKLGCSLNQSTIPNIANVEIPAKEGTMAEKIGYPVLGWHIANQK-- : UniRef90_S4RZE5
UniRef90_UPI000258D5F2 : -CNEGEEQTLLTILLDTRFDNLSPSMRVNTIDNLAGFLGLHLSSFSMHPQNLKDNMDSSVVLSGPGNVKHRKEKHTAIQWQVGCDLWKHQTDLVNRLREQAKDGTLAEVMQLPVLLWRVKTE--- : UniRef90_UPI000258D5F2
UniRef90_F4X8I3 : -CEDGEDQTILTILLDARMDQLSPTIRVNAIENLAGFLGMHTSAFSMHSQSIKDALDSSVIFTGPGNVRHHKNKETTIQWQVGCDLWKHQTELVKQLREQAKDGTLAEVLQLPVMSWRVRT---- : UniRef90_F4X8I3
UniRef90_E2BC96 : -CDDDEEQTILTVLLDARLDRLSPRARVDAIENLAGFLGMHKSAFSMHSQTKHDNM-LSVLFGGHGNVPYHREMFTTIQWQVGCDLWRHQVELIRQLREQAKDGTLAEVLQLPVILWRVKT---- : UniRef90_E2BC96
UniRef90_E1ZVE2 : -CDDGEEQTVLTILLDAPIEKLSPFVRTNAIENLAGFLGMHTSAFSMHSQGLKAL-GSSVILSGPGNVRFRKNHLTTIQWQVGCDLWKHQAEMVKQLREQAKDGTLAEVLQLPVILWHVRT---- : UniRef90_E1ZVE2
UniRef90_F6U2G8 : ---------------------MTPKQRIDLLHRMRSFSEVELHNMKLVPVVNNRLFDMSAFMAGPGNAKKVVENGALLSWKLGCSLNQNSVPDIRGVEAPAREGAMSAQLGYPVVGWHIANKKPA : UniRef90_F6U2G8
UniRef90_V5GWJ3 : -CPANEDHTVLTLVLDKNIRAIKPKQRIIAVNNIAKFFGLPYSAFTLKPQLKDDITDSSVLLAGPGNLHKTSKVSSLVQVPVGCDLWPSTTPLVHQLKQQARDGTIAEVLRLPLIGWRVKTEKP- : UniRef90_V5GWJ3
UniRef90_V5H8L8 : SCPAGNPVAMATVTVDADANDLRPHERARLLTGLAHFLEVPVAEASMAPMADEPAYDNSALMAGAGDSPSRLTAGLRLRWRVGCDVEPHHAAALKRLEASAEDGSLARLLGHPVVGWHVSSVQPT : UniRef90_V5H8L8
UniRef90_C3YV90 : -CLPGEPFTMVTVIVDADPDKLYPKDKLKLLSGMKAHMKVPLDFLKLLPMGNKRILDASAFMAGPGNVKQAKTEGMLLSWTVGCGSDTSNLRGVNRVEETAKSGEMARDLGHDVIGWHVTSPKP- : UniRef90_C3YV90
UniRef90_UPI0003C43C06 : -CTRTGSVTSAEIIIHAAAESLDVQERLYLVCTMAEYLHLDPTSLALNPYVHRSRWNLTVLAEDTSHINFLESHYIGLYWPVGCGIFAMLSELVQVLRHNVDSHRLSQLLGYEIAGWRIIKR--- : UniRef90_UPI0003C43C06
UniRef90_UPI00035952A3 : -CKREEPETVATIILDTDIEQMMPSDRLALLKRFLGHMELHEDMVKVLPVGQSSMHDGSALVSGTGDCTSPKTSGTFMSWPVGCGVKTGHFTILQRLDDDSGSGRMAEMLKCPIIGWHVTN---- : UniRef90_UPI00035952A3
UniRef90_UPI00046D7D3E : -CTEDQDRTMLTILIDARYENLKPSAKVRALENLAGFFGLHPSSISIQPEVKESSSSASSVLSGPGNVRRREKHSTLVQWQVGCDGWPHQIDTIKQIPEQARDGTLSEVMELPVYQWRVR----- : UniRef90_UPI00046D7D3E
UniRef90_U4TSB6 : SCKPEEDNTVLTLLLDRHLHAIKPKQRVVAINNIAKFLSLPQSAFTFLQSGNDDITDSAVVLAGPGNIQTRRKSGSSLEVPVGCDLWESTALLIHNLKQQARDGTIAEVLRLPLIGWRVKTEKP- : UniRef90_U4TSB6
UniRef90_G6CPI6 : TCVRNENRLVLVILIDGAFHRIAPRQRIRALMELASFMALDGDEFWMEPYKAESAQSHVVLMSGPGTTQRRKSATTAIYLNVGCGLWSRHKVLVSGLREQSRDGTLHQILRLPVLGWRLIAVK-- : UniRef90_G6CPI6
UniRef90_K1QS28 : -CKREQPETAATIIVDADMMTMSPADRIDLINMLTEHLNLASDMMKMIPLGEKEVFDKSALVSGQGDSKTLVTPGTMLSWLVGCGVMKDHMNILQKVEDSAASGKMKRSVGHSVVGWHVTNEKP- : UniRef90_K1QS28
UniRef90_U3JMR6 : -CGKEAPITCAEMILSAGAATLEVQERLSMVSRMAEYLHLDRSLLTLLQHTGPAARGSHILAEDTRHINLTASHYLGLSWPLTCGGFALLHEFIQVLQHNMNSHHLSRLLGYEIAGWRI------ : UniRef90_U3JMR6
UniRef90_V4B4U7 : -CKREQPETKVTIILDTDLEKLTSNGRLDLLNRFS-YLNLIPEMLKMIPVNGNPITDDTALVSGPGNVKEPKESGVFVSWRVGCGVDPGHLPILQQVEAEAQNGQLAEALKNAILSWHVTNSR-- : UniRef90_V4B4U7
UniRef90_G1NLT4 : -CGKEVPITSAEIILSTGAKTLEARERLYIVYTIAEYLHLDSSLVTLLDVVHRNLQNLTVLARATSHIDFTVNRYVGLNWPVKCGELAVLHEFVQVLQHNIDSQHLSQLLRYEISGWRILKKKP- : UniRef90_G1NLT4
UniRef90_R4GD17 : -CVKDISVTFAEIIISAP-NTLEIRERLYLICTMADYLHLDPSLLTLTTFSNH-LRNLTVLAEDIRYTNPTKQHSVGIYWPVGFGVFAMMHELIQVLQHNVESNSLSQLLGFEISGWRVLKK--- : UniRef90_R4GD17
UniRef90_W4ZKQ4 : -CPPEKPAVRATIILDADWSLLTPQERINMVSKLSKYSRIPMTAFKLLPEKDDN-KGYQALAAGSGNIATAKHEGLSLSWVVGCGRNIDQLPVVTILEGASKDGSMAEKLNYDIKGWYVSSNTP- : UniRef90_W4ZKQ4
UniRef90_H9IXF1 : TCIGDENRLVLLILVDGAFHKIVPRQRIRALMQLANFMALDGDEFWMEPYKTETHPD--TILSGIGSSRKRGDATTAIYLNVGCGLWDRHKVLVAGLREQSRDGTLEQLLRLPVIGWRLLAVKPT : UniRef90_H9IXF1
UniRef90_U6D9L0 : ----DEPVTVLTVILDADLTKMTPKQRLELLHRMRSFSEVELPNMKLVPVVNNRLFDMSAFMAGPGNAKKVVENGALLSWKLGCSLNQNNVPDIRGVEAPAR----------------------- : UniRef90_U6D9L0
UniRef90_R7UZC3 : -CPKGSSVTRATIVIDAG--DLSSELRWALTSAMAEHLGIPRNVLRLLPV-DTPFLDSSALVAGPGDVTEAEKSPVAIEWEVGCGVQAVHMPILTSLEASSKDGRMRRSIGHGIVGWHVTNHK-- : UniRef90_R7UZC3
UniRef90_L7LVG6 : -CGSGDPVAVAVLTVDADANRASPEARAQLLSGLAKFLGFSTNEVTLSPMAPEPAYDEAALLAGAGDSRQRHTQGLRLRWRVGCDVEAAHAAALARLETAARDATLARLLGHPVVGWHVSSVQ-- : UniRef90_L7LVG6
UniRef90_V8NS36 : ------SITFAEIVLRTE-DTLEIKEQLNLICTMAEYLHLDPSSLTLIPVLNKYFQNLTVLAEDIRYINSTKGHRVGLCWPVGFGVFAMLPELIQVLSHNVESDNLSQLLGYEIVGWRVLK---- : UniRef90_V8NS36
UniRef90_J9JLT1 : -CKNTEDSILLCLVIGMNFKSIQPLQRLIALKNLAGFLSLPQDAVLLVPQVSSWLIDYLVTSERQSHKKHQFNDTSFVLWEVGCGGDQEHIDHVRQMQSNTVDGTLSEVLQLPVTSWRLVN---- : UniRef90_J9JLT1
UniRef90_UPI0003F06004 : -CDAGEAKTLATVILDCDVNLMDGKQRMQLMTDFADFLALDVNDITLSSTVIGHLLDTAILAAGPGNADPVIQNGVEISWQLSCGLFKKINDFSMVIEHNAKSGRLTDVTGLPVIGWHVSMRKST : UniRef90_UPI0003F06004
UniRef90_A0A023EZ15 : -CKQLDEQTILSVVLDLKLSKLRADERVQLVKRFASFFNLEVIRLKQMEEKDEPLFN-SYITAGPGNIKKSFHESFILQWQVGCELWEKNTHLIDRIKKIARDGSLSKVLQHPVVGWTLRTE--- : UniRef90_A0A023EZ15
UniRef90_D9IFS3 : ----------------------------------------------LVPVVNNRLFDMSAFMAGPGNAKKVVENGALLSWKLGCSLNQNSVPDIRGVETPAREGTMSAHLGYPVVGWHIANKKPT : UniRef90_D9IFS3
UniRef90_H3AFZ1 : ACTTQNSVTFAEIIL---FTTTEAKKRLVLISTMAEYLHLDPLLMTLSIYRNQSLNDITILAEDISHVHLENSNNMEVYWPVSCGSFEMLSELIQVLRQNVNSGHLSQVLGYHIPAWRI------ : UniRef90_H3AFZ1
UniRef90_T1IV57 : -CKRSESSWRLVISIDSNISTMPSSNRGELLLKASEYLNAAQDELQLLLRNDRNSLDDSAIRAGPGNANIYQTANAVIIWKIACQILTPSIEVVSKLESDARNGALSEVVGVPVIGWHLTKH--- : UniRef90_T1IV57
UniRef90_A7SEJ5 : -CHSGLPVEAATIIFDLHAEKVDGKGRCALMKRVAEFAAVESLHFSLGKGHNTALKDVQMLTAGPGNVQDARQPGLVISWQIGCGIDLAGTRVASLLKSSAETGAFHEALSAPVTGWHVATGFP- : UniRef90_A7SEJ5
UniRef90_K7IQG2 : -CTEDQDRTMLTILIDARYENLKPSAKVRALENLAGFFGLH---------------------------------------PVGCDGWPHQIDTIKQIPEQARDGTLSEVMELPVYQWRVR----- : UniRef90_K7IQG2
UniRef90_W4Y330 : TCRRNEIKTLMSVVFDANINHLNGSSRMSLITRLAPFVNQPLEEFSMHSSVIDRLQKNIVVAAGPGNIHSASNEGVVVSWPLPCATQSLINQFPNVMARNIASGHLRDTTGYDVISWYISKAR-- : UniRef90_W4Y330
UniRef90_T1FQ26 : -CKKNKHVTTALIILNKEFYDITPQSKVNMLKRFSNSYNFPLPSLQLFDLKEMNHFNKTALVAGPGDSNPNFEHSIVIKWLVGCGVQKRHLVVLQQVEIEAQDGRLKDLLGLGVVGWYLATATPT : UniRef90_T1FQ26
UniRef90_W4WLD1 : -CEDGEDQTILTILLDARMDQLSPTIRVNAIENLAGFLGMHTSAFSMHSQSIKDIMDSSVIFTGPGNVRHHKNKETTIQWQ-------------------------------------------- : UniRef90_W4WLD1
UniRef90_T1PB74 : -CRYGDNELVLSLVLNYNWHDLNESRRSKVLDKLSKFFAIPKEFITMESVTKHDLFEMQKESVKKGNNKCHTNNNGRVDFIIGCTYFTITEPIVKQIEQQFKEGALDNITG-EKFGWWIIWRK-- : UniRef90_T1PB74
UniRef90_W5NDW6 : GCPAGETVTYSAIILQADVFSLSAGRRLLLVSTMGEYLRLDPFSLKLRSFRSPSLENSTLLTEGIGDSPDT-HAAVEVYWPVGCGDFQMVSELVRVLRYSKDSGHLSHLLGLHLTGWRVFT---- : UniRef90_W5NDW6
UniRef90_S4P4G7 : TCLRNENRLQLVILIDGAFHRISHRQRIRALMELAHFMALDGDEFWMEPYKLESAQSHMVLMSGPGTTKRRREATTAIYLNVG------------------------------------------ : UniRef90_S4P4G7
UniRef90_UPI0003599FD0 : ----DGDRVVSSLILCTTMSGLQPRKRLQILESLAEFLSIPISTLTFASSQGEGLHGFQLVSAGPGSDDCTLKENVELLWHLPCPTVRHLADFVKVLQHNVDGGRLQEELG-------------- : UniRef90_UPI0003599FD0
UniRef90_B3S750 : ACPRSEKVRVVNIVLQMNVPGLTGQARISLIEKLASRYQLHRSRVYLH-HGDKPIIGQSYIASTSGSSNTLK---GTVSWVIGCNVMTGSQYGITIRKHIA-DGTFSQTVGNSIVGY-------- : UniRef90_B3S750
UniRef90_E0VQL2 : -------------------------------NNCRKYFSEEKSLL-----NKWSISNDFHLLEGFGNINKSLHSSASVSFQVGCGRNIKNEYLIDKIKIEALDGTLSEVLLHPVVSWHIKNEFP- : UniRef90_E0VQL2
UniRef90_A0A034V5W9 : SCRSENSEIVLSLVLKSDWTDLSENRKNKVLDKLSKFFAIPKEFIVMESATKRELSEMQKEAIRRGYNKCYKHPLGRVSFVLGCGSFTMSESIKKQIGAQMKDGSIDNITG-EKFGWWVIWRK-- : UniRef90_A0A034V5W9
UniRef90_B3MF54 : GCSNSQSEVVLSLVLKKDWSDLTATKRAHVQAKLAKFFAIPKEFISLDSVSKLELKSMHKLAGGKGNKN-VETLNRRLSFMIGCDYFAMGEPIAMQIAHQVKDGTIGAL---------------- : UniRef90_B3MF54
UniRef90_B4GG41 : GCQNQQNEIVLSLLLKKDWSELTATKRAHVQAKLAKFFAIPKEFISLDSVSKRELRSMHKLAGGKGNKNIETLNRGRASFMIGCGYFVMGEPIAKQIAHQVKDGTIGAL---------------- : UniRef90_B4GG41
UniRef90_B4J9X8 : -CQPTQSEILLSLLLRKDWSELSLAKRSHIQSKLAKFFAIPKEFITLDSVSKRELGNMHKMAMRKGHVETANRHLGRASFMIGCGYFSMGEPIAKQIAHQIKDGTIGAL---------------- : UniRef90_B4J9X8
UniRef90_B4NMF4 : -CKQLESEVVFGLLLKMDWSELSADKRAQVKAKLATFFAIPKEFVYLDSISKHELNAMHLLSIHKGDIDYTKQPLGRASFVIGCGLFNMGKIIANEISHQIKDGTINAL---------------- : UniRef90_B4NMF4
: 1---------11--------21--------31--------41--------51--------61--------71--------81--------91--------101-------111-------121-- :
OrigSeq : ACAADEPVTVLTVILDADLTKMTPKQRIDLLNRMQSFSEVELHNMKLVPVVNNRLFDMSAFMAGPGNAKKVVENGALLSWKLGCSLNQNSVPDIRGVETPAREGAMSAQLGYPVVGWHIANKKPT : OrigSeq
Jnet : -------EEEEEEEE--------HHHHHHHHHHHHHHH-----EEEEE----------EEEEE------------EEEEEEE--------HHHHHHHHHHHH-HHHHHHH----EEEEEE----- : Jnet
jhmm : -------EEEEEEEE--------HHHHHHHHHHHHHHH-----EEEEE----------EEEEE------------EEEEEEE--------HHHHHHHHHHHH-HHHHHHH----EEEEEE----- : jhmm
jpssm : -------EEEEEEEEE-------HHHHHHHHHHHHHH------EEEEEE---------EEEEE-----------EEEEEEEE---------HHHHHH------HHHHHHH---EEEEEEE----- : jpssm
Lupas 14 : ----------------------------------------------------------------------------------------------------------------------------- : Lupas 14
Lupas 21 : ----------------------------------------------------------------------------------------------------------------------------- : Lupas 21
Lupas 28 : ----------------------------------------------------------------------------------------------------------------------------- : Lupas 28
Jnet_25 : -B------BBBBBBB-B-B--B-B--BB-BB--BB-BB-BB--BB-BB------BB-BBBBBB----B------BBBBBBBBBB-B---BB-BB--B---B--B-B--BB-B-BBBBBBB----- : Jnet_25
Jnet_5 : ---------BBBBBB------------B-BB--B----------B-B-------B---BBBB---------------B-B-B-----------B--B--------B---B---B-BB-------- : Jnet_5
Jnet_0 : ----------B-BB-------------------B-------------------------------------------B----------------------------------------------- : Jnet_0
Jnet Rel : 99888845888887615788763789999999987521677643675114777577753687436777641155168888615777776420233223431131467752586089998547899 : Jnet Rel
Notes
Key:
Colour code for alignment:
Blue - Complete identity at a position
Shades of red - The more red a position is, the higher the level of
conservation of chemical properties of the amino acids
Jnet - Final secondary structure prediction for query
jalign - Jnet alignment prediction
jhmm - Jnet hmm profile prediction
jpssm - Jnet PSIBLAST pssm profile prediction
Lupas - Lupas Coil prediction (window size of 14, 21 and 28)
Note on coiled coil predictions - = less than 50% probability
c = between 50% and 90% probability
C = greater than 90% probability
Jnet_25 - Jnet prediction of burial, less than 25% solvent accesibility
Jnet_5 - Jnet prediction of burial, less than 5% exposure
Jnet_0 - Jnet prediction of burial, 0% exposure
Jnet Rel - Jnet reliability of prediction accuracy, ranges from 0 to 9, bigger is better.