SILENT_MODE BLOCK_FILE jp_kGpM8DG.concise.blc MAX_NSEQ 784 MAX_INPUT_LEN 786 OUTPUT_FILE jp_kGpM8DG.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 383 773 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 774 383 783 H SPACE SUB_CHARS 1 774 383 783 E SPACE SUB_CHARS 1 774 383 783 - SPACE HELIX 7 777 64 COLOUR_TEXT_REGION 7 777 64 777 50 HELIX 93 777 139 COLOUR_TEXT_REGION 93 777 139 777 50 HELIX 165 777 180 COLOUR_TEXT_REGION 165 777 180 777 50 HELIX 199 777 213 COLOUR_TEXT_REGION 199 777 213 777 50 HELIX 217 777 250 COLOUR_TEXT_REGION 217 777 250 777 50 HELIX 256 777 269 COLOUR_TEXT_REGION 256 777 269 777 50 HELIX 279 777 303 COLOUR_TEXT_REGION 279 777 303 777 50 HELIX 316 777 330 COLOUR_TEXT_REGION 316 777 330 777 50 HELIX 347 777 376 COLOUR_TEXT_REGION 347 777 376 777 50 STRAND 141 782 145 COLOUR_TEXT_REGION 141 782 145 782 51 STRAND 157 782 158 COLOUR_TEXT_REGION 157 782 158 782 51 HELIX 6 782 22 COLOUR_TEXT_REGION 6 782 22 782 50 HELIX 25 782 30 COLOUR_TEXT_REGION 25 782 30 782 50 HELIX 32 782 63 COLOUR_TEXT_REGION 32 782 63 782 50 HELIX 93 782 140 COLOUR_TEXT_REGION 93 782 140 782 50 HELIX 165 782 180 COLOUR_TEXT_REGION 165 782 180 782 50 HELIX 198 782 214 COLOUR_TEXT_REGION 198 782 214 782 50 HELIX 216 782 250 COLOUR_TEXT_REGION 216 782 250 782 50 HELIX 256 782 270 COLOUR_TEXT_REGION 256 782 270 782 50 HELIX 277 782 303 COLOUR_TEXT_REGION 277 782 303 782 50 HELIX 315 782 330 COLOUR_TEXT_REGION 315 782 330 782 50 HELIX 347 782 375 COLOUR_TEXT_REGION 347 782 375 782 50 STRAND 330 783 330 COLOUR_TEXT_REGION 330 783 330 783 51 HELIX 7 783 64 COLOUR_TEXT_REGION 7 783 64 783 50 HELIX 95 783 118 COLOUR_TEXT_REGION 95 783 118 783 50 HELIX 124 783 139 COLOUR_TEXT_REGION 124 783 139 783 50 HELIX 163 783 179 COLOUR_TEXT_REGION 163 783 179 783 50 HELIX 204 783 209 COLOUR_TEXT_REGION 204 783 209 783 50 HELIX 223 783 250 COLOUR_TEXT_REGION 223 783 250 783 50 HELIX 257 783 266 COLOUR_TEXT_REGION 257 783 266 783 50 HELIX 280 783 303 COLOUR_TEXT_REGION 280 783 303 783 50 HELIX 317 783 329 COLOUR_TEXT_REGION 317 783 329 783 50 HELIX 347 783 376 COLOUR_TEXT_REGION 347 783 376 783 50