SILENT_MODE BLOCK_FILE jp_C0NNm66.concise.blc MAX_NSEQ 829 MAX_INPUT_LEN 831 OUTPUT_FILE jp_C0NNm66.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 216 818 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 819 216 828 H SPACE SUB_CHARS 1 819 216 828 E SPACE SUB_CHARS 1 819 216 828 - SPACE STRAND 8 822 12 COLOUR_TEXT_REGION 8 822 12 822 51 STRAND 17 822 18 COLOUR_TEXT_REGION 17 822 18 822 51 STRAND 24 822 27 COLOUR_TEXT_REGION 24 822 27 822 51 STRAND 49 822 53 COLOUR_TEXT_REGION 49 822 53 822 51 STRAND 64 822 70 COLOUR_TEXT_REGION 64 822 70 822 51 STRAND 88 822 92 COLOUR_TEXT_REGION 88 822 92 822 51 STRAND 134 822 140 COLOUR_TEXT_REGION 134 822 140 822 51 STRAND 160 822 165 COLOUR_TEXT_REGION 160 822 165 822 51 STRAND 178 822 184 COLOUR_TEXT_REGION 178 822 184 822 51 STRAND 189 822 191 COLOUR_TEXT_REGION 189 822 191 822 51 HELIX 31 822 45 COLOUR_TEXT_REGION 31 822 45 822 50 HELIX 72 822 83 COLOUR_TEXT_REGION 72 822 83 822 50 HELIX 120 822 128 COLOUR_TEXT_REGION 120 822 128 822 50 HELIX 145 822 155 COLOUR_TEXT_REGION 145 822 155 822 50 HELIX 196 822 213 COLOUR_TEXT_REGION 196 822 213 822 50 STRAND 8 827 12 COLOUR_TEXT_REGION 8 827 12 827 51 STRAND 17 827 18 COLOUR_TEXT_REGION 17 827 18 827 51 STRAND 24 827 26 COLOUR_TEXT_REGION 24 827 26 827 51 STRAND 49 827 53 COLOUR_TEXT_REGION 49 827 53 827 51 STRAND 65 827 70 COLOUR_TEXT_REGION 65 827 70 827 51 STRAND 88 827 92 COLOUR_TEXT_REGION 88 827 92 827 51 STRAND 134 827 140 COLOUR_TEXT_REGION 134 827 140 827 51 STRAND 160 827 165 COLOUR_TEXT_REGION 160 827 165 827 51 STRAND 178 827 184 COLOUR_TEXT_REGION 178 827 184 827 51 STRAND 189 827 190 COLOUR_TEXT_REGION 189 827 190 827 51 HELIX 31 827 45 COLOUR_TEXT_REGION 31 827 45 827 50 HELIX 72 827 83 COLOUR_TEXT_REGION 72 827 83 827 50 HELIX 121 827 127 COLOUR_TEXT_REGION 121 827 127 827 50 HELIX 145 827 155 COLOUR_TEXT_REGION 145 827 155 827 50 HELIX 196 827 213 COLOUR_TEXT_REGION 196 827 213 827 50 STRAND 8 828 12 COLOUR_TEXT_REGION 8 828 12 828 51 STRAND 17 828 19 COLOUR_TEXT_REGION 17 828 19 828 51 STRAND 24 828 27 COLOUR_TEXT_REGION 24 828 27 828 51 STRAND 49 828 53 COLOUR_TEXT_REGION 49 828 53 828 51 STRAND 64 828 70 COLOUR_TEXT_REGION 64 828 70 828 51 STRAND 88 828 92 COLOUR_TEXT_REGION 88 828 92 828 51 STRAND 134 828 140 COLOUR_TEXT_REGION 134 828 140 828 51 STRAND 160 828 164 COLOUR_TEXT_REGION 160 828 164 828 51 STRAND 178 828 184 COLOUR_TEXT_REGION 178 828 184 828 51 STRAND 188 828 192 COLOUR_TEXT_REGION 188 828 192 828 51 HELIX 31 828 45 COLOUR_TEXT_REGION 31 828 45 828 50 HELIX 48 828 48 COLOUR_TEXT_REGION 48 828 48 828 50 HELIX 72 828 84 COLOUR_TEXT_REGION 72 828 84 828 50 HELIX 120 828 128 COLOUR_TEXT_REGION 120 828 128 828 50 HELIX 145 828 155 COLOUR_TEXT_REGION 145 828 155 828 50 HELIX 196 828 213 COLOUR_TEXT_REGION 196 828 213 828 50