QUERY : GQQLNRLLLEWIGAWDPFGLGKDAYDVEAASVLQAVYETEDARTLAARIQSIYEFAFDEPIPFPHCLKLARRLLELKQAAS : QUERY
UniRef90_K9A784 : --KMNQAAVHLLEEWDPFHLGPDHYDTETADVVAALQGIDDPSTLAKVIQETYEHSFEQWIPFEDCVAISYKLIAIKFEAK : UniRef90_K9A784
UniRef90_F2F7N0 : --EMNQKCVHLLEQWDPFSYGTDSYSTETADVVAALQNIDDPTTLAKVIQRVYEYSFEQWIPFEQCVAIAYKLIAVKFEAK : UniRef90_F2F7N0
UniRef90_E5WF77 : -QQTNLLLVYTLDQWDPFGVGPGNYDTEIADSVQAVHDLNDLMKLARKIQSIYEFSFEEIIPLEKCKEISGRLLEIKNNGS : UniRef90_E5WF77
UniRef90_UPI0002F3BA4B : --EMNRKAVKILQLWDPFNLGSEAYDTEAADVVADLQGIDHPTELAKRIQVVYEHSFEQWIPIEKCVQIAYKLIAVKFES- : UniRef90_UPI0002F3BA4B
UniRef90_U5LDQ8 : -QVMHMMMYQALDQWDPFRCGEGNYDTEIADAIHAVHDLDSPDKLARKIQGIYEFSFESIIPLEQCKKMAETLLVIKNSGS : UniRef90_U5LDQ8
UniRef90_W4EQ39 : ---MNRKAIHILSEWDPFEMGNFTYDTEAADVVAELQHIDDPTVLGKKIQGIYEQSFERWIPIEECIGISYKLLAVKFEAK : UniRef90_W4EQ39
UniRef90_K6DMP9 : --QTNLQFVDVLNEWDPFHLKNGDYDTEIADTIQAVHELNDPSKLAKRIQAIYEFSFEKIIPMNSCLKVAEELLMIKENES : UniRef90_K6DMP9
UniRef90_R9C4M4 : SQEMNLEFIRLLNEWDPFSIGEGNYETEIADSLQALYDLDSEEELANAIQAIYEFSFEEVIPLENCLAISNKLMYVKRSSS : UniRef90_R9C4M4
UniRef90_E3ICS2 : ---MNWQLLHAIRAWDPFGYGNDAYETEAVDVLQAVHDCDEPTTLAGKIQAIYEFSFERKIPLNECIKMAKSLLAMKQAA- : UniRef90_E3ICS2
UniRef90_W3AC57 : --EMNRKAARVLEEWDPFSVGEDQYETEITDVVAQLHLLDHPSDLAKQIQMIYEFSFDKWIPLEKCVDISYKLLGFKYEAK : UniRef90_W3AC57
UniRef90_UPI00018508DC : --EMNTQLVLLLKKWDPFKIGPNHYDTEIADVIQATHSTEDSKHLAGAIQHIYEFSFEEFIPFIHCEVIAEKLLYIKNQAS : UniRef90_UPI00018508DC
UniRef90_K6D561 : SKMLNEKLREVINKWDPLGLGPGAYEVEVVDIIQAVHEIDDLKYLAKRIQFIYEFSFEESIPLPECQKVARRMLLLKETS- : UniRef90_K6D561
UniRef90_F9DWX9 : --EMKKRAVALLKEWDPFSAGEDAYDLEIADVVAGLHHIDHPTDLAKCIRNVYEQSYQIWIPLEKCMEISYKLLAVKYEAK : UniRef90_F9DWX9
UniRef90_UPI00047DCDE4 : AQQTNLKIMDVLLQWDPLGYGAGHYETEVVDVLQAVHLFEEEIKLARKIQAIFEFSFEEIIPLSDCERMARKLLLIKHNSS : UniRef90_UPI00047DCDE4
UniRef90_UPI0002F5AB0A : ---MNKKAKQALMKWDPFQMGEGAYEIEASDVVAALQAIDDPTELAKVIQRVYEHSFEIWIPFENCVEMAYQLIAIKFEAK : UniRef90_UPI0002F5AB0A
UniRef90_M3CYD5 : -NEMNRKAVEIMKYWDPFAIGSESYGQEIGNVITQLQVLDHPSELAKTIQTSYEYSFGKWIPLEQCVDISYKLIALKFEAK : UniRef90_M3CYD5
UniRef90_UPI000463DFA5 : --QAVREMIKIISKWDPFQYGEEFYETEAVDVVQAVYDEDDPNVLAKRIQQIFETSFEQTLPIDSCREVAGRLLFMKDSSS : UniRef90_UPI000463DFA5
UniRef90_UPI0002886EC7 : --QMNQKAVRIVVQWNPFNLEGFDYATEAADVVAALQTIDDPSELGKVIQNVYEQSFEEWIPLEKCVDISYKLIGLKFETK : UniRef90_UPI0002886EC7
UniRef90_UPI0002E1F034 : -QQTNIKLYEILYYWDPLGYGEGFYETEISDVLQTLHVHDNAEELARKIQSIYEFSSEEVIPLPQCKQKASELLLAKDQSS : UniRef90_UPI0002E1F034
UniRef90_UPI00047D8F05 : --QTNLQYVDLLNEWNPFNLNNGGYDTEIADTIQAIHELDDCIELAKRIQSIYDFSFEKMIPLEECLKISKELLVIK---- : UniRef90_UPI00047D8F05
UniRef90_W1SHN1 : --QTNLQYVDVLNEWDPFRLKNGGYETEIADVIQAIHELNDCPKLAKRIQTIYEFSFEILIPLHDCVKIAAELLAIKEN-- : UniRef90_W1SHN1
UniRef90_UPI000479EA33 : --QTNLKFVDLLNEWDPFQLKEGNYDTEIADTIQAIHELEDLSELAEKIQSIYEFSFEQVIPINLCLEIAEKLLLIKNNDS : UniRef90_UPI000479EA33
UniRef90_UPI00046FD847 : --EMNKKAIHLLEEWDPFLAGSDAYELEIADVVEELQLLDHPTDLAKRIREIYEHSYAMWIPLEDCMQISYKLLAVKFEAK : UniRef90_UPI00046FD847
UniRef90_UPI0001E89ADC : ---VNVRLMENLLQWDPLGYGVDAYDTECVDVVQAVHELDDIEKLAKKIQAIYEFSFEQFIPLSKCMEKAKELMVIKNE-- : UniRef90_UPI0001E89ADC
UniRef90_W4RJW2 : SRELSYKLIHVLNKWDPFKVGEGEFDPEIADILQAVHDYDEADKIARRIQSIFEFSFEQVLPYQECHSIANTLLAIKNE-- : UniRef90_W4RJW2
UniRef90_UPI0002896239 : NQQANLQIMITLQEWDPLGYGAGSYETEAVDVLEAAHQFDDPAKLARKIQSIFEFSFEEIIPLKECENMAQKLITIINNAT : UniRef90_UPI0002896239
UniRef90_B1HXE4 : ---MNQAAVHLLEEWDPFHLGPDHYDTDTADVVAALQGIDDPSTLAKVIQETYEHSFEQWIPFEECVAI------------ : UniRef90_B1HXE4
UniRef90_M7P3N7 : --EINHFAADLLERWDPFDQGPGAYETEIADVIAALHEAAHPSELAERIRLIYEHSYEFWIPHEVCMDISYKLIALKYGA- : UniRef90_M7P3N7
UniRef90_M5P0L2 : --QAAMQIIQTVKKWDPFQAGQDFYETEAAEIVQAVYTEDDPEQLGKTIQAVFEVSFDQVLPLEDCIKLAEKLLVIKDSST : UniRef90_M5P0L2
UniRef90_A7GUB3 : ------RMVELVKNWDPFQMGAEFYETEASDVVYVVSAFDDPRYIAKKIQHIYFMSFEEVPPLEKCEKLAEQLLILKEGGS : UniRef90_A7GUB3
UniRef90_UPI00036CA688 : --QLNFALADVLNGFDPFDAGPGFYDTEIADSIYAVHRLDEINKLAAAIRSIYEHSFDAPMPGGNPTVLAEKLLMIKNNSS : UniRef90_UPI00036CA688
UniRef90_E3E3Y7 : --QAVREMMKIISKWDPFKYGEEFYETEAVDIVQAVYTKENPQELAESIQDIFEASFEQILPLDNCMKVAERLLIIKDSSS : UniRef90_E3E3Y7
UniRef90_UPI0003680045 : ------KMIDFVKNWDPFQMGPEFYETEASDIVYIVSTFDDAKYIAKKIQHIYLISFDRTLPIEKCQWLAEQLLLLKDGGS : UniRef90_UPI0003680045
UniRef90_A7Z858 : --QAVMEMMKIIAKWDPFKYGEDFYETEAVDIVQAVYSEDRADKLAAAIQDIFEASFEQKLPIEGCQKAAEQLLFIKESSS : UniRef90_A7Z858
UniRef90_G9QLP6 : --KTNLQLADILMGWDPFRIGAGQYDTEMADIIQAVHETDNLETLVRKIRAIFELSFEELLPREEIEPIASALLAVKENSS : UniRef90_G9QLP6
UniRef90_W8QZH9 : --QAVEEMIQIIKAWDPFQYGEDFYETEPADVISALYDAEDPLSFAKDIQAIYHHSFDQLLPMESCQHIANQLFIIRESSS : UniRef90_W8QZH9
UniRef90_UPI00028816FC : --EMNQRAVQMIADWNPFDIPDFDYATEAADIAATMQTIDDPAALAKEIQLIFEASFEEWLPLEACEAIAQRLTLLKYEA- : UniRef90_UPI00028816FC
UniRef90_K9AL13 : NNDLNIELYKLIANWNPMNFDDPTLDAEVYEVMDQVHQLGEPDKIAHEIQNIYQFSFETTIPYERCKAIADQAVALKSSCK : UniRef90_K9AL13
UniRef90_B9DIW0 : -NEVNIALYQLLADWNPMHFEDKTMDAEVYEMMDAVHQIDDVNELARKFQSIFQYSFEEKLAIEDCQKKANEALSLEGTC- : UniRef90_B9DIW0
UniRef90_UPI00042A285D : -----MRAEDLLLAWDPLGYGVGSYGPEFDDIVVALTQLDTEGELDAHIRHVLTDAFGECPPESETRAMARQLLASSQSC- : UniRef90_UPI00042A285D
UniRef90_C2WDP9 : ------KMVEMVKDWDPFQMGPEFYETEASDVVYVVSTFEDPKYIAKKIQHIYFMSFEEVLAIEKC--------------- : UniRef90_C2WDP9
UniRef90_UPI00040E515B : -----IQLTQWLEEWDPLNIGKASYDTEKADIMGILYVTDNPRIVAQKIKETLDFSFGEAPSTEKCLEAAHTLILLKNDIS : UniRef90_UPI00040E515B
UniRef90_S3FI41 : ---------DLLLAWDPLGYGLGSYGPEFDDITVALVQIDSEAELNETIRRILTDSFGECPSEDDTRAMARQLLTSSEAC- : UniRef90_S3FI41
UniRef90_F0P8M1 : NNDLNIRLYQYLADWNPMQFDDPTMDAEVYEMMDAVHQIGEAEAVAQAFQQIYQFSFDETLSYDVCLVKATEAVNMQTEC- : UniRef90_F0P8M1
UniRef90_UPI00047D1221 : ---------DLLLTWDPLGYGTGSYGPEFDEVMMALIDVNSPEQLTEIIRRTLLDAFDECPPESEIIEMAQRLFASS---- : UniRef90_UPI00047D1221
UniRef90_UPI000362F660 : SPEGNVELYRLLGRWCPSAAGDFDFDSEIYDSMDVIFRHEDVEKASAGIQDVFRFSFERTVPLGEIRPVVIEAFEIIE--- : UniRef90_UPI000362F660
UniRef90_F7PWF5 : ----------VLNEWDPEGLRPDEYDPEVKEIINLGNEL-SSEELGHKIQGLFLLSFDDHHPIEECIQVAEKILSSKH--- : UniRef90_F7PWF5
UniRef90_E3EH22 : ---MNNDIVQMINEWNPIEIYPDEYYSEIHKIHEKSKETNSIRELAKQIHSVFAQSFEFDKSIEDCQSIAEKIMNI----- : UniRef90_E3EH22
UniRef90_E6U228 : ---ANNVVTKHVNNWDPMGAPDDEYEFEIERITKEISRCQDEIEVAEVIKDIFDDSFGRDFPLEECLEIAKKI-------- : UniRef90_E6U228
UniRef90_UPI000472357A : ---MNDEIVRTINEWNPIEIYPDEYYSEIRKIYEKSNQTNSVEELAEQIHVIFTQSFEKEFSIEECQWIAEKIIDVID--- : UniRef90_UPI000472357A
UniRef90_UPI00047B46B0 : -----MKIKQIINRWDPIHAPKDEYNFEILDIVDASNKLFKADELAAAINKIFTSSFDDAFSMEECMEIAKEI-------- : UniRef90_UPI00047B46B0
UniRef90_UPI0001E89A4E : -----------INEWDPMGAGEDRYRLEIDKIVDALVEIDSVDKLGVYIKQTMDASFSTDLPSITCLQVA----------- : UniRef90_UPI0001E89A4E
UniRef90_B1YKU5 : ---------ELLKKYDPFHLGEGNYPTEMSAILRLLTVHDQISPLAEAIGIVFEESFDE---------------------- : UniRef90_B1YKU5
UniRef90_UPI000380301E : ---MTKKITLIINDWNPIEIYPLEYDSEVKQIYELLTLNDTKSELAEKIYQVFEKKFGKLFTLIECEVIAEKILNALNN-- : UniRef90_UPI000380301E
UniRef90_R9K5C6 : -------IKKIINDWDPIGAPDDEYWTEIEEIEQLFRFTNNPIKLSEAIYKIFVKSFGEDKSESECEQIAQVILS------ : UniRef90_R9K5C6
UniRef90_S9UJL8 : ---MVEEITKIINDWNPAEIYPDEYQCEVSKIVELLSSFESKSTISKQIYDLFESCFEFRKPYHECEEITEILINIQSS-- : UniRef90_S9UJL8
UniRef90_X2GMU4 : ---------EVIDNWDPLHYPEDEYDPEIRMIVELLPTVTSVENLALRIHEVFMFSVDEVFAISNCYPIALEI-------- : UniRef90_X2GMU4
UniRef90_UPI000287CF6E : -------IKKIIDKWDPLGLPSDEYDYETEQIFNFIKNTDNIAVLANKIMKVFLFFFEDAFSYDECLSVAKEILLIK---- : UniRef90_UPI000287CF6E
UniRef90_J2ZSR8 : ------KVKNIIDRWDPIGLEHDHYRFEINEIIILLQSYSTPEELAKHVESIFIEYFDDKIPFAECLDVARILFTI----- : UniRef90_J2ZSR8
UniRef90_W8YTJ3 : ---MFELIRDVVNEWDPFNLPPDEYKHEVRAIVCHIHDNITAEELSFRISAIFSNHFGE---SEKCLRVAQKIIE------ : UniRef90_W8YTJ3
UniRef90_UPI00047E8F00 : ---MKEKVAKIINDWDPIDLPKDEYEMEIDLISKLLDESTDLEHIANCISTVFTSRFGDDVKYNECFNIAKKILY------ : UniRef90_UPI00047E8F00
UniRef90_H2JGJ9 : ------------NEWDPIHAPSDEYKNEINQIFYCYQNYSDVRTIAKTIKEIFTEQFGHFFTYEDCFIIANKILNS----- : UniRef90_H2JGJ9
UniRef90_W7CZV0 : ---MRNKVKHVIDEWDPIEAPSDEYESEINQIVHFLSRHKVTDELANKIKTIFINAFDDSITEEEYLAIARKILN------ : UniRef90_W7CZV0
UniRef90_R2SUV6 : ---MYDKVEKIINEWDPIDLPEDEYSQEIRKIMNVLKRKESVENLASTLKTIFIESFGDDIFFDNELDIANKLLNLE---- : UniRef90_R2SUV6
UniRef90_S5LXQ5 : ---MYEKVEKIINDWDPIELPKDEYSQEINKIISIVQENHNIDVLAKGIRKIFIDSFGENLIFKNNEEIAEKILAL----- : UniRef90_S5LXQ5
UniRef90_G8LYT2 : ------KIEKIINDWDPINLPPDEYRTEIEKIYNSCDKVCDKEALGRLIYKVFVDEFGDDFNVNKCVEIAGLILS------ : UniRef90_G8LYT2
UniRef90_D5E3Q3 : -NDVKETIQSIIYTWNPLSLASEEYEYEATWILPMVYKVENVESLAIEITDILNQSFNSTLIKEECIGIAQQI-------- : UniRef90_D5E3Q3
: 1---------11--------21--------31--------41--------51--------61--------71-------- :
OrigSeq : GQQLNRLLLEWIGAWDPFGLGKDAYDVEAASVLQAVYETEDARTLAARIQSIYEFAFDEPIPFPHCLKLARRLLELKQAAS : OrigSeq
Jnet : --HHHHHHHHHHHH------------HHHHHHHHHHHH---HHHHHHHHHHHHHHH--------HHHHHHHHHHHHHH--- : Jnet
jhmm : --HHHHHHHHHHH-------------HHHHHHHHHHHH---HHHHHHHHHHHHHH----------HHHHHHHHHHHHH--- : jhmm
jpssm : -HHHHHHHHHHHHH------------HHHHHHHHHHHH---HHHHHHHHHHHHHHH-------HHHHHHHHHHHHHH---- : jpssm
Lupas 14 : --------------------------------------------------------------------------------- : Lupas 14
Lupas 21 : --------------------------------------------------------------------------------- : Lupas 21
Lupas 28 : --------------------------------------------------------------------------------- : Lupas 28
Jnet_25 : ---BB--BB-BB--BBBB-B----B--BB--BB-BB--B--B--BB--B--BB--BB---B-B--B--BB--BB-B----- : Jnet_25
Jnet_5 : -------B---B--B-------------B--B---B--------B---B--BB------------B---B--BB------- : Jnet_5
Jnet_0 : -------B------------------------------------B---B----------------B---B----------- : Jnet_0
Jnet Rel : 738999999998603677777777642899999998606866899999999987503788875308999999888740899 : Jnet Rel
Notes
Key:
Colour code for alignment:
Blue - Complete identity at a position
Shades of red - The more red a position is, the higher the level of
conservation of chemical properties of the amino acids
Jnet - Final secondary structure prediction for query
jalign - Jnet alignment prediction
jhmm - Jnet hmm profile prediction
jpssm - Jnet PSIBLAST pssm profile prediction
Lupas - Lupas Coil prediction (window size of 14, 21 and 28)
Note on coiled coil predictions - = less than 50% probability
c = between 50% and 90% probability
C = greater than 90% probability
Jnet_25 - Jnet prediction of burial, less than 25% solvent accesibility
Jnet_5 - Jnet prediction of burial, less than 5% exposure
Jnet_0 - Jnet prediction of burial, 0% exposure
Jnet Rel - Jnet reliability of prediction accuracy, ranges from 0 to 9, bigger is better.