SILENT_MODE BLOCK_FILE jp_urmcv_k.concise.blc MAX_NSEQ 869 MAX_INPUT_LEN 871 OUTPUT_FILE jp_urmcv_k.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 76 858 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 859 76 868 H SPACE SUB_CHARS 1 859 76 868 E SPACE SUB_CHARS 1 859 76 868 - SPACE STRAND 4 862 8 COLOUR_TEXT_REGION 4 862 8 862 51 STRAND 13 862 17 COLOUR_TEXT_REGION 13 862 17 862 51 STRAND 62 862 66 COLOUR_TEXT_REGION 62 862 66 862 51 STRAND 68 862 73 COLOUR_TEXT_REGION 68 862 73 862 51 HELIX 19 862 27 COLOUR_TEXT_REGION 19 862 27 862 50 HELIX 33 862 45 COLOUR_TEXT_REGION 33 862 45 862 50 HELIX 48 862 55 COLOUR_TEXT_REGION 48 862 55 862 50 STRAND 4 867 8 COLOUR_TEXT_REGION 4 867 8 867 51 STRAND 13 867 17 COLOUR_TEXT_REGION 13 867 17 867 51 STRAND 62 867 65 COLOUR_TEXT_REGION 62 867 65 867 51 STRAND 68 867 73 COLOUR_TEXT_REGION 68 867 73 867 51 HELIX 19 867 27 COLOUR_TEXT_REGION 19 867 27 867 50 HELIX 33 867 45 COLOUR_TEXT_REGION 33 867 45 867 50 HELIX 48 867 55 COLOUR_TEXT_REGION 48 867 55 867 50 STRAND 4 868 8 COLOUR_TEXT_REGION 4 868 8 868 51 STRAND 13 868 18 COLOUR_TEXT_REGION 13 868 18 868 51 STRAND 62 868 73 COLOUR_TEXT_REGION 62 868 73 868 51 HELIX 20 868 27 COLOUR_TEXT_REGION 20 868 27 868 50 HELIX 33 868 45 COLOUR_TEXT_REGION 33 868 45 868 50 HELIX 47 868 54 COLOUR_TEXT_REGION 47 868 54 868 50