QUERY           : TNLSDIIEKETGKQLVIQESILMLPEEVEEVIGNKPESDILVHTAYDESTDENVMLLTSDAPEYKPWALVIQDSNGENKIKML : QUERY 
UniRef90_P14739 : TNLSDIIEKETGKQLVIQESILMLPEEVEEVIGNKPESDILVHTAYDESTDENVMLLTSDAPEYKPWALVIQDSNGENKIKML : UniRef90_P14739

                : 1---------11--------21--------31--------41--------51--------61--------71--------81- :
OrigSeq         : TNLSDIIEKETGKQLVIQESILMLPEEVEEVIGNKPESDILVHTAYDESTDENVMLLTSDAPEYKPWALVIQDSNGENKIKML : OrigSeq

Jnet            : --HHHHHHH----HHHHHHHHH---HHHHHHH-------EEEEE---------EEEEE--------EEEEEE------EEE-- : Jnet
jhmm            : --HHHHHH-----EEEHHHHHHH---HHHHHH-------EEEE----------EEEE----------EEEEE-------EEE- : jhmm
jpssm           : ---HHHHHH----HHHHHHHHH--HHHHHHHH-------EEEEEE-------EEEEEE--------EEEEEEE-----EEE-- : jpssm

Lupas 14        : ----------------------------------------------------------------------------------- : Lupas 14
Lupas 21        : ----------------------------------------------------------------------------------- : Lupas 21
Lupas 28        : ----------------------------------------------------------------------------------- : Lupas 28

Jnet_25         : --B--BB----B--BBB--BBBBBB--B--BB-------BBBBBBB------BBBBBBB-B--B-BBBBBB--------B--- : Jnet_25
Jnet_5          : --------------------B--B---B-----------BBB-----------B-BB---------BBB-B------------ : Jnet_5
Jnet_0          : ----------------------------------------------------------------------------------- : Jnet_0
Jnet Rel        : 98248886125701136425530631899875168887448882137788751688713677877418898716887318618 : Jnet Rel

Notes
Key:
Colour code for alignment:
Blue            - Complete identity at a position
Shades of red   - The more red a position is, the higher the level of
                  conservation of chemical properties of the amino acids
Jnet            - Final secondary structure prediction for query
jalign          - Jnet alignment prediction
jhmm            - Jnet hmm profile prediction
jpssm           - Jnet PSIBLAST pssm profile prediction

Lupas           - Lupas Coil prediction (window size of 14, 21 and 28)

Note on coiled coil predictions  - = less than 50% probability
                                 c = between 50% and 90% probability
                                 C = greater than 90% probability

Jnet_25         - Jnet prediction of burial, less than 25% solvent accesibility
Jnet_5          - Jnet prediction of burial, less than 5% exposure
Jnet_0          - Jnet prediction of burial, 0% exposure
Jnet Rel        - Jnet reliability of prediction accuracy, ranges from 0 to 9, bigger is better.