SILENT_MODE BLOCK_FILE jp_9Y1eUAk.concise.blc MAX_NSEQ 195 MAX_INPUT_LEN 197 OUTPUT_FILE jp_9Y1eUAk.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 64 184 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 185 64 194 H SPACE SUB_CHARS 1 185 64 194 E SPACE SUB_CHARS 1 185 64 194 - SPACE STRAND 24 188 26 COLOUR_TEXT_REGION 24 188 26 188 51 HELIX 6 188 17 COLOUR_TEXT_REGION 6 188 17 188 50 HELIX 29 188 36 COLOUR_TEXT_REGION 29 188 36 188 50 HELIX 50 188 62 COLOUR_TEXT_REGION 50 188 62 188 50 STRAND 24 193 26 COLOUR_TEXT_REGION 24 193 26 193 51 HELIX 6 193 17 COLOUR_TEXT_REGION 6 193 17 193 50 HELIX 29 193 36 COLOUR_TEXT_REGION 29 193 36 193 50 HELIX 50 193 62 COLOUR_TEXT_REGION 50 193 62 193 50 STRAND 24 194 25 COLOUR_TEXT_REGION 24 194 25 194 51 HELIX 6 194 17 COLOUR_TEXT_REGION 6 194 17 194 50 HELIX 29 194 36 COLOUR_TEXT_REGION 29 194 36 194 50 HELIX 50 194 62 COLOUR_TEXT_REGION 50 194 62 194 50