QUERY : EPTEFEYLRKVLFEYMMGRETKTMAKVITTVLKFPDDQTQKILEREDARLMSWLRSSS : QUERY
UniRef90_UPI00034FF659 : EPTEFEYLRKVMFEYMMGRETKTMAKVITTVLRFPTDQAQQILQREETRPLSWLLSSS : UniRef90_UPI00034FF659
UniRef90_I3JU50 : EPTEIEYLRKVLFEYMMGRETKTMAKVITSMLKFPPDQAQKVLDKEDSKPIPWLR--- : UniRef90_I3JU50
UniRef90_F6YI51 : EPTEFEYLRKVMFEYMMGHETKTLAKVITTVLKFPADQAQKVLEREDARPRPGMKSE- : UniRef90_F6YI51
UniRef90_V9K812 : EPTELEYLKKVLYEYMMGKETKTLAKVITTVLKFPADQTQKILEREDSRST------- : UniRef90_V9K812
UniRef90_H2UAM4 : ETTEIEYLRKVLFEYMMGRETKTMAKVITSILKFPPDQAQKVLEKEDSKVT------- : UniRef90_H2UAM4
UniRef90_L7M1Y9 : EPTEYEYLRNILFEYMMGKETMTLSKVIAAVLKFSDEQKNQILQRQEARQ-------- : UniRef90_L7M1Y9
UniRef90_G7Y6A7 : ELVEYEYLRNVLFEYMTGRETATLAKVLCSILRFNAEQTKRVLQYEDDKSRTWF---- : UniRef90_G7Y6A7
UniRef90_E0W1G5 : --TEYEYLRNILYEYMMGKEQMVLAKVLSAIVKFNDEQTHNVLEKEQQRQTLFGQ--- : UniRef90_E0W1G5
UniRef90_V4AXC5 : ----FQYLRNILYEYMMGKETKTLAKVISTVVNFDDEQKRNILAREDAKV-------- : UniRef90_V4AXC5
UniRef90_K7HRJ8 : DPAEAEYLRNVLYRYMLGKESVTLARVIGTVARFDDSQMKQIINSEEARQASW----- : UniRef90_K7HRJ8
UniRef90_T1KWH3 : EPTEYEYLRNIIFEYMMGREPMTLAKVIAAVLRFSNDQTEQLIRRQEH---------- : UniRef90_T1KWH3
UniRef90_UPI000359FBEF : EPTEFEYLKNILYEFMMGKETRTLARVIATVVRFSDEQTRNVVAKADAKSVSLF---- : UniRef90_UPI000359FBEF
UniRef90_E5SWE2 : EPTEAEYLKNILFRYMLGKECVTLAKAIAAVVKFSPMQTKEILTKEESRNNS------ : UniRef90_E5SWE2
UniRef90_W4ZIK5 : QNVQLQYLKKVLYEYMMGRETKTMAKVIAAVVKFSREQTDNIIAKEEQKQGLYLK--- : UniRef90_W4ZIK5
UniRef90_W4ZIK5 : ------YLKKVLYEYMMGRETKTMAKVIAAVVKFSREQTDNIIAKEEQKQ-------- : UniRef90_W4ZIK5
UniRef90_K7IVK2 : DSTEIEYLRNILYKYMMGKETMVLAKVIAAVVKFDQDQTSKILKKEEDK--------- : UniRef90_K7IVK2
UniRef90_U1MDM3 : EPTEAEYLRNVLYRYMLGKESVTLARVIATVAKFSREQVEAVVAKEEERNHSW----- : UniRef90_U1MDM3
UniRef90_B3RQH6 : --AEFEYLRNALFQYMVGRERLQMSKVLVALARFTSIQSQKILAKEQERNKSWL---- : UniRef90_B3RQH6
UniRef90_D2A6A9 : -STEIEYLKNVLYNYMLGKESMVLARVIAAVCKFDPQQTELILAKEQQKQT------- : UniRef90_D2A6A9
UniRef90_UPI0003F06336 : EQTELEYLRKVLFAYMTGKETKTMAKVIAAVMKFSQEETALIIAKEENRQLTWIAS-- : UniRef90_UPI0003F06336
UniRef90_S4Q0C2 : ENTELEYLKNILYEYLTGNHSITLAKVLAAVVKFDDRQTELVLQKEKERQ-GFLR--- : UniRef90_S4Q0C2
UniRef90_J9JKE2 : --CEMEYLRNILYEYMMGKQPMVLAKVLAAIVKFDSNQLSTILQKEEQKV-------- : UniRef90_J9JKE2
UniRef90_U6NKR9 : DPAEAEYLKNVLYRYMLGKEAVTLARVIGTVARFSKSEMDNVVTKEESRVAGWV---- : UniRef90_U6NKR9
UniRef90_W4VRH8 : -NTEFEYLRNILFQYLSGNNNSTLVKVIAAVLKFTPQQTQVVLEKEAHR--------- : UniRef90_W4VRH8
UniRef90_A0A034VK71 : -NTEFEYLKNIMFQYLTGSNNETLVKVISAVLKFSPQQTQVALEKEHQR--------- : UniRef90_A0A034VK71
UniRef90_F2UB23 : ------YLKNVVYQYMLGSHQEELAKVISTILQFTPKEHEEVLHSTTSRTRGWL---- : UniRef90_F2UB23
UniRef90_H2YYI0 : DPERVKYLRQVLFEYMMGSEGKTMAKVLVVLMQYPAEEAQKILEK------------- : UniRef90_H2YYI0
UniRef90_I1GI28 : ---EFDFFRNVLFEYMMGRQRQQLVRVIAALARFSDRQKKELFSKRD----------- : UniRef90_I1GI28
UniRef90_F2UJ00 : EGANLEYLKNIVYKYMMGRDR--MAKAIAAVLQFSPEEERRVMAASSTQQSSWL---- : UniRef90_F2UJ00
UniRef90_L8YCY7 : ---------------------QTMAKVITTVLKFPDDQTQKILEREDARLTVSFRS-- : UniRef90_L8YCY7
UniRef90_E0VC45 : EGANLEYLKNVVYSFLLSSDPKSMCNAIAAVLKFSDSELQKVI--DHSKNKWWTKSN- : UniRef90_E0VC45
UniRef90_A0A044V206 : -------------------EAETLARVIATVARFSHEQVNAVVAKEEQRNHGWV---- : UniRef90_A0A044V206
UniRef90_F2U9S1 : --VDIDYLRNVVYQYMMGIHADEVAHIIASVLEFSPEQRRDLFA-------------- : UniRef90_F2U9S1
UniRef90_T1F2R0 : ENANMEYLKNVVYQYIIGSSRHRMFNAISTILQFSPVEKQTVLSK-----KGWL---- : UniRef90_T1F2R0
UniRef90_UPI0004410F3A : EEVNFEYLRNVILQFLEHKERPHLVRILSTILRFTPQETRRLIAK------------- : UniRef90_UPI0004410F3A
UniRef90_H3H9K8 : -----EYLKNIVYKYMASDQDEAMEKAIATVLNFTPAEVTSIQEKRKQQQ-GWF---- : UniRef90_H3H9K8
: 1---------11--------21--------31--------41--------51------ :
OrigSeq : EPTEFEYLRKVLFEYMMGRETKTMAKVITTVLKFPDDQTQKILEREDARLMSWLRSSS : OrigSeq
Jnet : ---HHHHHHHHHHHHH-----HHHHHHHHHH----HHHHHHHHHHHHH---------- : Jnet
jhmm : ---EHHHHHHHHHHHHH----HHHHHHHHHH----HHHHHHHHHHHHH---------- : jhmm
jpssm : ---HHHHHHHHHHHHH-----HHHHHHHHHH----HHHHHHHHHHHH-------E--- : jpssm
Lupas 14 : ---------------------------------------------------------- : Lupas 14
Lupas 21 : ---------------------------------------------------------- : Lupas 21
Lupas 28 : ---------------------------------------------------------- : Lupas 28
Jnet_25 : ----B-BBB-BBB-BBBB-----BB-BBBBBB-B----B--BB---------BB---- : Jnet_25
Jnet_5 : -------B--BBB--B-------BB-BBB-BB-------------------------- : Jnet_5
Jnet_0 : -------B------------------BB--B--------------------------- : Jnet_0
Jnet Rel : 9971899999999875188861368888874048758999999988516787522589 : Jnet Rel
Notes
Key:
Colour code for alignment:
Blue - Complete identity at a position
Shades of red - The more red a position is, the higher the level of
conservation of chemical properties of the amino acids
Jnet - Final secondary structure prediction for query
jalign - Jnet alignment prediction
jhmm - Jnet hmm profile prediction
jpssm - Jnet PSIBLAST pssm profile prediction
Lupas - Lupas Coil prediction (window size of 14, 21 and 28)
Note on coiled coil predictions - = less than 50% probability
c = between 50% and 90% probability
C = greater than 90% probability
Jnet_25 - Jnet prediction of burial, less than 25% solvent accesibility
Jnet_5 - Jnet prediction of burial, less than 5% exposure
Jnet_0 - Jnet prediction of burial, 0% exposure
Jnet Rel - Jnet reliability of prediction accuracy, ranges from 0 to 9, bigger is better.