SILENT_MODE BLOCK_FILE jp_DpGXgfO.concise.blc MAX_NSEQ 916 MAX_INPUT_LEN 918 OUTPUT_FILE jp_DpGXgfO.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 313 905 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 906 313 915 H SPACE SUB_CHARS 1 906 313 915 E SPACE SUB_CHARS 1 906 313 915 - SPACE STRAND 4 909 6 COLOUR_TEXT_REGION 4 909 6 909 51 STRAND 12 909 18 COLOUR_TEXT_REGION 12 909 18 909 51 STRAND 42 909 43 COLOUR_TEXT_REGION 42 909 43 909 51 STRAND 72 909 76 COLOUR_TEXT_REGION 72 909 76 909 51 STRAND 155 909 157 COLOUR_TEXT_REGION 155 909 157 909 51 STRAND 180 909 186 COLOUR_TEXT_REGION 180 909 186 909 51 STRAND 207 909 209 COLOUR_TEXT_REGION 207 909 209 909 51 STRAND 259 909 262 COLOUR_TEXT_REGION 259 909 262 909 51 HELIX 26 909 38 COLOUR_TEXT_REGION 26 909 38 909 50 HELIX 44 909 44 COLOUR_TEXT_REGION 44 909 44 909 50 HELIX 52 909 65 COLOUR_TEXT_REGION 52 909 65 909 50 HELIX 87 909 100 COLOUR_TEXT_REGION 87 909 100 909 50 HELIX 105 909 110 COLOUR_TEXT_REGION 105 909 110 909 50 HELIX 137 909 151 COLOUR_TEXT_REGION 137 909 151 909 50 HELIX 164 909 173 COLOUR_TEXT_REGION 164 909 173 909 50 HELIX 194 909 201 COLOUR_TEXT_REGION 194 909 201 909 50 HELIX 231 909 240 COLOUR_TEXT_REGION 231 909 240 909 50 HELIX 246 909 254 COLOUR_TEXT_REGION 246 909 254 909 50 HELIX 267 909 275 COLOUR_TEXT_REGION 267 909 275 909 50 HELIX 283 909 291 COLOUR_TEXT_REGION 283 909 291 909 50 STRAND 4 914 6 COLOUR_TEXT_REGION 4 914 6 914 51 STRAND 12 914 13 COLOUR_TEXT_REGION 12 914 13 914 51 STRAND 15 914 18 COLOUR_TEXT_REGION 15 914 18 914 51 STRAND 72 914 77 COLOUR_TEXT_REGION 72 914 77 914 51 STRAND 105 914 110 COLOUR_TEXT_REGION 105 914 110 914 51 STRAND 155 914 158 COLOUR_TEXT_REGION 155 914 158 914 51 STRAND 180 914 187 COLOUR_TEXT_REGION 180 914 187 914 51 STRAND 206 914 210 COLOUR_TEXT_REGION 206 914 210 914 51 STRAND 259 914 263 COLOUR_TEXT_REGION 259 914 263 914 51 HELIX 26 914 38 COLOUR_TEXT_REGION 26 914 38 914 50 HELIX 42 914 48 COLOUR_TEXT_REGION 42 914 48 914 50 HELIX 52 914 65 COLOUR_TEXT_REGION 52 914 65 914 50 HELIX 86 914 99 COLOUR_TEXT_REGION 86 914 99 914 50 HELIX 138 914 151 COLOUR_TEXT_REGION 138 914 151 914 50 HELIX 164 914 173 COLOUR_TEXT_REGION 164 914 173 914 50 HELIX 194 914 202 COLOUR_TEXT_REGION 194 914 202 914 50 HELIX 231 914 240 COLOUR_TEXT_REGION 231 914 240 914 50 HELIX 245 914 254 COLOUR_TEXT_REGION 245 914 254 914 50 HELIX 267 914 276 COLOUR_TEXT_REGION 267 914 276 914 50 HELIX 283 914 290 COLOUR_TEXT_REGION 283 914 290 914 50 STRAND 4 915 6 COLOUR_TEXT_REGION 4 915 6 915 51 STRAND 12 915 18 COLOUR_TEXT_REGION 12 915 18 915 51 STRAND 42 915 44 COLOUR_TEXT_REGION 42 915 44 915 51 STRAND 72 915 76 COLOUR_TEXT_REGION 72 915 76 915 51 STRAND 154 915 157 COLOUR_TEXT_REGION 154 915 157 915 51 STRAND 180 915 184 COLOUR_TEXT_REGION 180 915 184 915 51 STRAND 246 915 254 COLOUR_TEXT_REGION 246 915 254 915 51 STRAND 259 915 261 COLOUR_TEXT_REGION 259 915 261 915 51 STRAND 298 915 299 COLOUR_TEXT_REGION 298 915 299 915 51 HELIX 26 915 37 COLOUR_TEXT_REGION 26 915 37 915 50 HELIX 53 915 65 COLOUR_TEXT_REGION 53 915 65 915 50 HELIX 88 915 100 COLOUR_TEXT_REGION 88 915 100 915 50 HELIX 102 915 111 COLOUR_TEXT_REGION 102 915 111 915 50 HELIX 137 915 151 COLOUR_TEXT_REGION 137 915 151 915 50 HELIX 164 915 174 COLOUR_TEXT_REGION 164 915 174 915 50 HELIX 194 915 200 COLOUR_TEXT_REGION 194 915 200 915 50 HELIX 231 915 240 COLOUR_TEXT_REGION 231 915 240 915 50 HELIX 267 915 271 COLOUR_TEXT_REGION 267 915 271 915 50 HELIX 283 915 291 COLOUR_TEXT_REGION 283 915 291 915 50