SILENT_MODE BLOCK_FILE jp_kgAckMN.concise.blc MAX_NSEQ 674 MAX_INPUT_LEN 676 OUTPUT_FILE jp_kgAckMN.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 147 663 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 664 147 673 H SPACE SUB_CHARS 1 664 147 673 E SPACE SUB_CHARS 1 664 147 673 - SPACE STRAND 17 667 19 COLOUR_TEXT_REGION 17 667 19 667 51 STRAND 86 667 89 COLOUR_TEXT_REGION 86 667 89 667 51 STRAND 93 667 97 COLOUR_TEXT_REGION 93 667 97 667 51 STRAND 102 667 113 COLOUR_TEXT_REGION 102 667 113 667 51 STRAND 125 667 131 COLOUR_TEXT_REGION 125 667 131 667 51 STRAND 138 667 144 COLOUR_TEXT_REGION 138 667 144 667 51 HELIX 23 667 35 COLOUR_TEXT_REGION 23 667 35 667 50 STRAND 17 672 19 COLOUR_TEXT_REGION 17 672 19 672 51 STRAND 86 672 89 COLOUR_TEXT_REGION 86 672 89 672 51 STRAND 93 672 96 COLOUR_TEXT_REGION 93 672 96 672 51 STRAND 102 672 113 COLOUR_TEXT_REGION 102 672 113 672 51 STRAND 125 672 131 COLOUR_TEXT_REGION 125 672 131 672 51 STRAND 138 672 144 COLOUR_TEXT_REGION 138 672 144 672 51 HELIX 23 672 35 COLOUR_TEXT_REGION 23 672 35 672 50 STRAND 17 673 19 COLOUR_TEXT_REGION 17 673 19 673 51 STRAND 69 673 70 COLOUR_TEXT_REGION 69 673 70 673 51 STRAND 87 673 88 COLOUR_TEXT_REGION 87 673 88 673 51 STRAND 94 673 98 COLOUR_TEXT_REGION 94 673 98 673 51 STRAND 102 673 113 COLOUR_TEXT_REGION 102 673 113 673 51 STRAND 124 673 131 COLOUR_TEXT_REGION 124 673 131 673 51 STRAND 138 673 143 COLOUR_TEXT_REGION 138 673 143 673 51 HELIX 23 673 34 COLOUR_TEXT_REGION 23 673 34 673 50