SILENT_MODE BLOCK_FILE jp_oRLjayx.concise.blc MAX_NSEQ 673 MAX_INPUT_LEN 675 OUTPUT_FILE jp_oRLjayx.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 411 662 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 663 411 672 H SPACE SUB_CHARS 1 663 411 672 E SPACE SUB_CHARS 1 663 411 672 - SPACE STRAND 69 666 71 COLOUR_TEXT_REGION 69 666 71 666 51 STRAND 238 666 242 COLOUR_TEXT_REGION 238 666 242 666 51 HELIX 38 666 50 COLOUR_TEXT_REGION 38 666 50 666 50 HELIX 76 666 86 COLOUR_TEXT_REGION 76 666 86 666 50 HELIX 92 666 101 COLOUR_TEXT_REGION 92 666 101 666 50 HELIX 109 666 116 COLOUR_TEXT_REGION 109 666 116 666 50 HELIX 125 666 131 COLOUR_TEXT_REGION 125 666 131 666 50 HELIX 137 666 147 COLOUR_TEXT_REGION 137 666 147 666 50 HELIX 160 666 170 COLOUR_TEXT_REGION 160 666 170 666 50 HELIX 176 666 211 COLOUR_TEXT_REGION 176 666 211 666 50 HELIX 214 666 230 COLOUR_TEXT_REGION 214 666 230 666 50 HELIX 260 666 270 COLOUR_TEXT_REGION 260 666 270 666 50 HELIX 273 666 275 COLOUR_TEXT_REGION 273 666 275 666 50 HELIX 285 666 288 COLOUR_TEXT_REGION 285 666 288 666 50 HELIX 293 666 316 COLOUR_TEXT_REGION 293 666 316 666 50 HELIX 331 666 367 COLOUR_TEXT_REGION 331 666 367 666 50 HELIX 377 666 409 COLOUR_TEXT_REGION 377 666 409 666 50 STRAND 68 671 72 COLOUR_TEXT_REGION 68 671 72 671 51 STRAND 239 671 242 COLOUR_TEXT_REGION 239 671 242 671 51 HELIX 43 671 49 COLOUR_TEXT_REGION 43 671 49 671 50 HELIX 76 671 86 COLOUR_TEXT_REGION 76 671 86 671 50 HELIX 92 671 101 COLOUR_TEXT_REGION 92 671 101 671 50 HELIX 109 671 117 COLOUR_TEXT_REGION 109 671 117 671 50 HELIX 125 671 132 COLOUR_TEXT_REGION 125 671 132 671 50 HELIX 137 671 147 COLOUR_TEXT_REGION 137 671 147 671 50 HELIX 160 671 170 COLOUR_TEXT_REGION 160 671 170 671 50 HELIX 176 671 212 COLOUR_TEXT_REGION 176 671 212 671 50 HELIX 214 671 230 COLOUR_TEXT_REGION 214 671 230 671 50 HELIX 260 671 270 COLOUR_TEXT_REGION 260 671 270 671 50 HELIX 273 671 274 COLOUR_TEXT_REGION 273 671 274 671 50 HELIX 285 671 288 COLOUR_TEXT_REGION 285 671 288 671 50 HELIX 293 671 316 COLOUR_TEXT_REGION 293 671 316 671 50 HELIX 331 671 367 COLOUR_TEXT_REGION 331 671 367 671 50 HELIX 377 671 409 COLOUR_TEXT_REGION 377 671 409 671 50 STRAND 14 672 15 COLOUR_TEXT_REGION 14 672 15 672 51 STRAND 70 672 71 COLOUR_TEXT_REGION 70 672 71 672 51 STRAND 166 672 166 COLOUR_TEXT_REGION 166 672 166 672 51 STRAND 238 672 241 COLOUR_TEXT_REGION 238 672 241 672 51 HELIX 34 672 52 COLOUR_TEXT_REGION 34 672 52 672 50 HELIX 77 672 86 COLOUR_TEXT_REGION 77 672 86 672 50 HELIX 92 672 100 COLOUR_TEXT_REGION 92 672 100 672 50 HELIX 112 672 114 COLOUR_TEXT_REGION 112 672 114 672 50 HELIX 125 672 130 COLOUR_TEXT_REGION 125 672 130 672 50 HELIX 137 672 147 COLOUR_TEXT_REGION 137 672 147 672 50 HELIX 164 672 165 COLOUR_TEXT_REGION 164 672 165 672 50 HELIX 167 672 169 COLOUR_TEXT_REGION 167 672 169 672 50 HELIX 176 672 187 COLOUR_TEXT_REGION 176 672 187 672 50 HELIX 190 672 206 COLOUR_TEXT_REGION 190 672 206 672 50 HELIX 209 672 209 COLOUR_TEXT_REGION 209 672 209 672 50 HELIX 214 672 229 COLOUR_TEXT_REGION 214 672 229 672 50 HELIX 259 672 269 COLOUR_TEXT_REGION 259 672 269 672 50 HELIX 272 672 276 COLOUR_TEXT_REGION 272 672 276 672 50 HELIX 285 672 288 COLOUR_TEXT_REGION 285 672 288 672 50 HELIX 292 672 316 COLOUR_TEXT_REGION 292 672 316 672 50 HELIX 330 672 339 COLOUR_TEXT_REGION 330 672 339 672 50 HELIX 343 672 367 COLOUR_TEXT_REGION 343 672 367 672 50 HELIX 377 672 409 COLOUR_TEXT_REGION 377 672 409 672 50