SILENT_MODE BLOCK_FILE jp_RB1thJo.concise.blc MAX_NSEQ 922 MAX_INPUT_LEN 924 OUTPUT_FILE jp_RB1thJo.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 256 911 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 912 256 921 H SPACE SUB_CHARS 1 912 256 921 E SPACE SUB_CHARS 1 912 256 921 - SPACE STRAND 79 915 87 COLOUR_TEXT_REGION 79 915 87 915 51 STRAND 111 915 117 COLOUR_TEXT_REGION 111 915 117 915 51 STRAND 140 915 146 COLOUR_TEXT_REGION 140 915 146 915 51 STRAND 165 915 170 COLOUR_TEXT_REGION 165 915 170 915 51 STRAND 173 915 177 COLOUR_TEXT_REGION 173 915 177 915 51 STRAND 193 915 201 COLOUR_TEXT_REGION 193 915 201 915 51 STRAND 241 915 246 COLOUR_TEXT_REGION 241 915 246 915 51 HELIX 4 915 18 COLOUR_TEXT_REGION 4 915 18 915 50 HELIX 43 915 44 COLOUR_TEXT_REGION 43 915 44 915 50 HELIX 63 915 76 COLOUR_TEXT_REGION 63 915 76 915 50 HELIX 92 915 106 COLOUR_TEXT_REGION 92 915 106 915 50 HELIX 129 915 137 COLOUR_TEXT_REGION 129 915 137 915 50 HELIX 203 915 219 COLOUR_TEXT_REGION 203 915 219 915 50 STRAND 56 920 58 COLOUR_TEXT_REGION 56 920 58 920 51 STRAND 79 920 87 COLOUR_TEXT_REGION 79 920 87 920 51 STRAND 111 920 117 COLOUR_TEXT_REGION 111 920 117 920 51 STRAND 140 920 143 COLOUR_TEXT_REGION 140 920 143 920 51 STRAND 165 920 170 COLOUR_TEXT_REGION 165 920 170 920 51 STRAND 173 920 178 COLOUR_TEXT_REGION 173 920 178 920 51 STRAND 193 920 201 COLOUR_TEXT_REGION 193 920 201 920 51 STRAND 241 920 246 COLOUR_TEXT_REGION 241 920 246 920 51 HELIX 4 920 17 COLOUR_TEXT_REGION 4 920 17 920 50 HELIX 63 920 76 COLOUR_TEXT_REGION 63 920 76 920 50 HELIX 92 920 106 COLOUR_TEXT_REGION 92 920 106 920 50 HELIX 129 920 137 COLOUR_TEXT_REGION 129 920 137 920 50 HELIX 139 920 139 COLOUR_TEXT_REGION 139 920 139 920 50 HELIX 203 920 219 COLOUR_TEXT_REGION 203 920 219 920 50 STRAND 79 921 87 COLOUR_TEXT_REGION 79 921 87 921 51 STRAND 111 921 117 COLOUR_TEXT_REGION 111 921 117 921 51 STRAND 141 921 148 COLOUR_TEXT_REGION 141 921 148 921 51 STRAND 165 921 169 COLOUR_TEXT_REGION 165 921 169 921 51 STRAND 173 921 176 COLOUR_TEXT_REGION 173 921 176 921 51 STRAND 193 921 201 COLOUR_TEXT_REGION 193 921 201 921 51 STRAND 241 921 246 COLOUR_TEXT_REGION 241 921 246 921 51 HELIX 5 921 18 COLOUR_TEXT_REGION 5 921 18 921 50 HELIX 42 921 45 COLOUR_TEXT_REGION 42 921 45 921 50 HELIX 62 921 78 COLOUR_TEXT_REGION 62 921 78 921 50 HELIX 93 921 106 COLOUR_TEXT_REGION 93 921 106 921 50 HELIX 130 921 137 COLOUR_TEXT_REGION 130 921 137 921 50 HELIX 203 921 220 COLOUR_TEXT_REGION 203 921 220 921 50