QUERY : MNKMAMIDLAKLFLASKITAIEFSERICVERRRLYGVKDLSPNILNCGEELFMAAERFEPDADRANYEIDDNGLKVEVRSILEKFKL : QUERY
UniRef90_A7FF55 : --SIVILEFAKSFINERVSAQVFANAYIEFWRIERDQRKDNEKLSECLSSIFCLADLYNPDSDREEYELDDKQLYEQVLQLINKLN- : UniRef90_A7FF55
UniRef90_Q5QGN0 : MNKMAIIELARNFLASKVTALQFSENICVERRKLYDIKEQDQNVLNCGEELFMIAELFEPDPERKSYELDEVGLRKEVKATLEKFHL : UniRef90_Q5QGN0
UniRef90_A8G949 : ---MKLVELGKSFIEKKISAEQFAEDIVIERRKLYGIEEPNKSVDKCGGELFILADCYNPEPDRDDYELDETGLRKEVKAILEKFNL : UniRef90_A8G949
UniRef90_Y1GAK4 : --SMSLIELARKLVSSQISADEFETQFFQMWRKEGQLTKDSKDVGECAVELFILADCYTSDPVRRESELDSYGLYKEVKATLEKYKL : UniRef90_Y1GAK4
UniRef90_U1UAW7 : MNRMAIIDLAKSFLSKEVGALEFSEKICVERRMLYGVKDQDRDVMNCGEELFMIAEVYNPDSERADYELDDAGLRAAVITALEKFNF : UniRef90_U1UAW7
UniRef90_K6K9L7 : MSRLKLIELGRDSLNRKISVNEFVSNIVIARRESYGSEEANKDIDHCAGELFIIADCFNPEPDRESYELDETGLRNEVKATLEKFHL : UniRef90_K6K9L7
UniRef90_E2MN56 : --SLTILEFARSYVAGRLTSEIFSEAYIELWKIERDLQLDDPSLSECLSSIFCAADMYEPDESREDYELDDEMLRAEVMSLVQK--- : UniRef90_E2MN56
UniRef90_S0ABQ9 : --SLKLIDLAKRLISSQLTADDFESQFFKLWREEGLLAKDSKDVGECASEIFILADCYTSNPDRRESELDSDGLKKEVKATLEKFNL : UniRef90_S0ABQ9
UniRef90_V1NYF8 : --SYLLVDFARSFGNGRLSAVAFAEAYMELWRIERDNKNIDENVSECLSSIFCVADMFNPDDDREEYEFDDEQLRKEINKLMDIY-- : UniRef90_V1NYF8
UniRef90_UPI000463F9E3 : --SLTILEFARSYVAGRLTSEVFSEAYIELWKIERDRKVLQLDLSECLSSIFCVADMYEPDESREEYELDDKMLRAEVANLLK---- : UniRef90_UPI000463F9E3
UniRef90_U1TY42 : MSGMRLVELGKEFVENKISAEGFSESIVKERRKLYGYEEIDKQVDKCSGELFILADCYNPASDRAESELDEVELKKEVITVLKKFNF : UniRef90_U1TY42
UniRef90_F8R4N8 : --SNKLIDFARGFVESKINADNFSDSYILMWKEERDANRLSIDVDEASSSIFCLADCYNPESDRDNYEFDEASLRKEIKATLEKFKL : UniRef90_F8R4N8
UniRef90_U1UFC9 : --SMKLIEIARELVSSKLTADDFESQFFTIWKEEGQLAKDSQRVGECASELFILADCYTSQPNRRESELDADGLKKEVKDTLERFHL : UniRef90_U1UFC9
UniRef90_UPI00046CB614 : --SLIALEFAKSFVNGRITAQVFAEAYIELYRIERDNGLLLKDVSECLSTIFCLADLYNPDSDKEEYELNDKQLIEQIEQELKKLN- : UniRef90_UPI00046CB614
UniRef90_H1RMF9 : --SSSLFEIATSFVAGKISATSFSDSYIDLWRIERDNGILQKDLSECLSSIFCAADMYCADDEREVYEFDEEQLKYEVSTILKKY-- : UniRef90_H1RMF9
UniRef90_A9I257 : --SFVLLEFAKSFVEGRISAPVFSEAYMELWKIERDSGSLIRDLSERLSSIFCAADMYNSDSEREEYEFDDEQLRFEVCKLVE---- : UniRef90_A9I257
UniRef90_U4WEZ9 : -----LLDFSKSFVDGRLSADVFSEAYIELWRIERDNKNIDVKISETLSSIFCLADMYNPDDDREDYEFSEEQLRDEIRKLI----- : UniRef90_U4WEZ9
UniRef90_W1J8M4 : --SLLLLEFSKSFVKGKICAQVFADAYIELWRIERDNNNINDKLSECLSSIFCLADMYNPEDDRLSYELNDEQLREKVSELIRQL-- : UniRef90_W1J8M4
UniRef90_K8X9K2 : --SFILLEFTKSYVQGRVKPETFSEAYIELYRIERDQNKDNAELSEYLSSIFCIVDLYNPELDKEEYEFNDEDLFIQVSTELKKLH- : UniRef90_K8X9K2
UniRef90_F5SMC2 : --SIVLSKFAESFVNERLTADIFADAYMELWKIERDLDLASKDLSQVNSTIFLMADLYNPESDREDYEFDEDKLRLNVKLELDKLKL : UniRef90_F5SMC2
UniRef90_A6V5R1 : --SMALIDLARNFLDGSLSGKSFTKKFFEMWRSEGLLKKDDDNLGACLRLMFGMADCFTDGPKDDDGEINEEELKQEVRELLKKYK- : UniRef90_A6V5R1
UniRef90_UPI00036EB341 : --SITILALAKSFQAGRLNADEFSNAYMELWKKEGLLSLDDDLLSECLSSIFCLADLYNSSPFRQGYELNEIQLKKKVSDLL----- : UniRef90_UPI00036EB341
UniRef90_M5TWS5 : --------FAQSFVNERMSAHVFSESYIELWKIERLLALDDVALSTCLSSIFCAADMYCEDVDRHAYELDAAQLHAAVVALIDEWK- : UniRef90_M5TWS5
UniRef90_E8XPF0 : --SQKLLTFARSFINGEISAEDFADPYQMLWKAEGDSLKDNYQDSEKCSTIFCLADQFNPDNDRDKYEFDADELKARVRAVLD---- : UniRef90_E8XPF0
UniRef90_C4S769 : -----------------MSATVFSEAYIELWRIERDNKNIDAKISECLSSIFCLADMYNPDEDREEYEFNDDQLRDEINKLIVNY-- : UniRef90_C4S769
UniRef90_T9TV59 : --SQSLKKYIDDFLAKNISAEYFTDTYMAKWKGERDSNLLKQDLSELLSSVFCVADMYNPDNDREEYEFNDEQLWNEVNNLMIDYK- : UniRef90_T9TV59
UniRef90_UPI0003EB5BE8 : --SIKLIDLTKKLVLSQISASDFEIQFFSLWREEGLLSKDSKEISECLYVIFDLAERFTPDTERSDIEIDEITLKKEAKLALEKFKF : UniRef90_UPI0003EB5BE8
UniRef90_Q1I936 : --SLTLLEFARSFIHDRLSATVFSEAYMELWKIERDNQTLLGDLSECLSSIFCAADMYCEDVD------------------------ : UniRef90_Q1I936
UniRef90_F1XCU5 : --SVLLLNFTKAYLNERINTNCFVDAYIELWRIERDLGLANIDLNLFLSSIFYIVDLYNPDSEKEEYEFNDIELYSKISEELALY-- : UniRef90_F1XCU5
UniRef90_M9SBE5 : --SMEMIDIAKRLLASSIDGKTFSEEFFKTWRSERDSGVLAQDLGRCLSLMFGLADSFTEGKKERPGELTEGELKIALSDLLKEYK- : UniRef90_M9SBE5
UniRef90_K1H7L3 : -NSLKLIKLIDAYLEGELLPSDFEKKYIELWRKYRDFDDIKKETQKYLDSIFCAVDAYCSEPSRDENDLDESGLLFEVNQLNQDWK- : UniRef90_K1H7L3
UniRef90_L1NRH0 : MKKMSLLCLATDFIDDKIDADTFVDAYMEMWRNASDFGGGEQDRADIAGSLYIIADRYCPLEFREDIELDEHELKQAVSIFLN---- : UniRef90_L1NRH0
UniRef90_M0BNZ9 : ----KYLELIREFIGGEMTAPEFERQYLDEFKSDRG-NFPSGDAFDPYHQLFVAVDAYCSDPERDEYDIDETELRAETKAQMEQ--- : UniRef90_M0BNZ9
UniRef90_I8D1R0 : -----------------MSAQVFANAYIEFWRIERDQRKDNEKLNECLSSIFCLADLYNPDSDREE--------------------- : UniRef90_I8D1R0
UniRef90_UPI0003B310F3 : --------------------------------------KDNEKLNECLSSIFCLADLYNPDSDREEYELDDKQLYEQVLQLINKLN- : UniRef90_UPI0003B310F3
UniRef90_G1YY66 : MNKMAMIDLAKLFLASKITAIEFSERICVERRRLYGVKDLSPNIFK----------------------------------------- : UniRef90_G1YY66
UniRef90_I6S206 : ------------------------------------LKKDDDNLGACLRLMFGMADCFTDGPKDNDGEINEEELKQEVRELLKKYK- : UniRef90_I6S206
UniRef90_UPI0003942796 : --SITVLALARAFSAERLTADEFSNAYMELWKFERDSNLLQEDLSECLSSIFCITDLYNP--------------------------- : UniRef90_UPI0003942796
UniRef90_U4W0Q9 : -----MLALIDSFVSGAMSAPEFEEKYLNAWREHRAADKQNKDTQRYFDSVFSAVDAYCSNPDLDEDDLDAQGLFDYVVNLRKTW-- : UniRef90_U4W0Q9
UniRef90_S6A1G0 : MSVDKYIKLITKFIDNAIDAKEFEQSFLEMFKTE--QEKISEKDYLVLDSLFGDVDMFCFDSELEEGDLTESDLRKSAEQTLERL-- : UniRef90_S6A1G0
UniRef90_UPI0002DE91A7 : ------------LVNNRVSADEFEALFLPLYK--GDLTKWSEEIYKILDQLFYAVDDYNHDPDLRDNDVNENELRNRAALALRELR- : UniRef90_UPI0002DE91A7
UniRef90_H5WPA8 : MNE-ALVEYARQFLSGAVPAEEFQRAYLGRFKNE--QRSLEEPLFEVLDELFGAVDAYTGDPEQPAFYLTEDGLRAQV--------- : UniRef90_H5WPA8
UniRef90_UPI000374B976 : -----LLSIMHRFVEKEIDVATFVSTYWKKWRDTNELYKPDKLHSSAYNRAFTAADCYQPETDKTDWAIGENQLRSEISEII----- : UniRef90_UPI000374B976
UniRef90_A0A022NPR9 : --SMALIDLARNFLDESLSGKSFTKKFFEMWRSEGASGLLKKDDDN----------------------------------------- : UniRef90_A0A022NPR9
UniRef90_L0WK27 : ----------------------------------GLANIDDERLNLFLSSIFYIVDLYNPDSEKEEYEFNDIELYSKISEELALY-- : UniRef90_L0WK27
UniRef90_D8G6M9 : ----KYIKLLQEFVGNTISADEFEQRFIQLFK--GDNNLQLGREFKILDKLFADVDAYCSDPDLIEFDIGEDQLQVSAEETLDKL-- : UniRef90_D8G6M9
UniRef90_S2XJ62 : MDVNKYKKLMVDFLEEKMSADEFQTQYFKVFKGSDDIMG--KPLFEILNGVFESADCYCLPGQETPFEISEQQLRKEINEALIKLN- : UniRef90_S2XJ62
UniRef90_UPI00035EDFAB : ------LRLMNDLVNGQMSGPEFARAWLSARRRLDGNERVRENFERILYDVFYLLDDYVIDPARGPGDITDEQLVDRVRDSLERLR- : UniRef90_UPI00035EDFAB
UniRef90_M0BSB1 : ----KYTDLIREFVRGEVTATEFSTKYMNEF--LDDDEIPDDEVFESLDYLFVEADAYCGPELRDD--------------------- : UniRef90_M0BSB1
: 1---------11--------21--------31--------41--------51--------61--------71--------81----- :
OrigSeq : MNKMAMIDLAKLFLASKITAIEFSERICVERRRLYGVKDLSPNILNCGEELFMAAERFEPDADRANYEIDDNGLKVEVRSILEKFKL : OrigSeq
Jnet : ---HHHHHHHHHHH-------HHHHHHHHHHHHH-------HHHHHHHHHHHHHHH--------------HHHHHHHHHHHHHHH-- : Jnet
jhmm : ---HHHHHHHHHHH-------HHHHHHHHHHHHH-------HHHHHHHHHHHHHHH--------------HHHHHHHHHHHHHHH-- : jhmm
jpssm : ---HHHHHHHHHHH-------HHHHHHHHHHHHH-------HHHHHHHHHHHHHHH--------------HHHHHHHHHHHHHHH-- : jpssm
Lupas 14 : --------------------------------------------------------------------------------------- : Lupas 14
Lupas 21 : --------------------------------------------------------------------------------------- : Lupas 21
Lupas 28 : --------------------------------------------------------------------------------------- : Lupas 28
Jnet_25 : ---B-BB-BB--BB---B-B--BB--BB-BBB----B--B---B--BBBBBBBBBBBBB-------B-B----BB--B--BB--B-- : Jnet_25
Jnet_5 : -----B--BB---B--------B---BB-------------------B--BBBBBB-----------------B---B--------- : Jnet_5
Jnet_0 : ---------B------------B---------------------------B-B-B----------------------B--------- : Jnet_0
Jnet Rel : 997689999998752788773789999999987427887317877689999887633677777777765278999999999987289 : Jnet Rel
Notes
Key:
Colour code for alignment:
Blue - Complete identity at a position
Shades of red - The more red a position is, the higher the level of
conservation of chemical properties of the amino acids
Jnet - Final secondary structure prediction for query
jalign - Jnet alignment prediction
jhmm - Jnet hmm profile prediction
jpssm - Jnet PSIBLAST pssm profile prediction
Lupas - Lupas Coil prediction (window size of 14, 21 and 28)
Note on coiled coil predictions - = less than 50% probability
c = between 50% and 90% probability
C = greater than 90% probability
Jnet_25 - Jnet prediction of burial, less than 25% solvent accesibility
Jnet_5 - Jnet prediction of burial, less than 5% exposure
Jnet_0 - Jnet prediction of burial, 0% exposure
Jnet Rel - Jnet reliability of prediction accuracy, ranges from 0 to 9, bigger is better.