SILENT_MODE BLOCK_FILE jp_1nF3OQl.concise.blc MAX_NSEQ 50 MAX_INPUT_LEN 50 OUTPUT_FILE jp_1nF3OQl.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 149 16 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 17 149 26 H SPACE SUB_CHARS 1 17 149 26 E SPACE SUB_CHARS 1 17 149 26 - SPACE STRAND 4 20 7 COLOUR_TEXT_REGION 4 20 7 20 51 STRAND 10 20 14 COLOUR_TEXT_REGION 10 20 14 20 51 STRAND 20 20 28 COLOUR_TEXT_REGION 20 20 28 20 51 STRAND 52 20 58 COLOUR_TEXT_REGION 52 20 58 20 51 STRAND 77 20 84 COLOUR_TEXT_REGION 77 20 84 20 51 STRAND 98 20 108 COLOUR_TEXT_REGION 98 20 108 20 51 STRAND 113 20 116 COLOUR_TEXT_REGION 113 20 116 20 51 STRAND 120 20 124 COLOUR_TEXT_REGION 120 20 124 20 51 HELIX 38 20 51 COLOUR_TEXT_REGION 38 20 51 20 50 HELIX 60 20 72 COLOUR_TEXT_REGION 60 20 72 20 50 HELIX 92 20 97 COLOUR_TEXT_REGION 92 20 97 20 50 HELIX 137 20 139 COLOUR_TEXT_REGION 137 20 139 20 50 STRAND 3 25 8 COLOUR_TEXT_REGION 3 25 8 25 51 STRAND 10 25 15 COLOUR_TEXT_REGION 10 25 15 25 51 STRAND 20 25 30 COLOUR_TEXT_REGION 20 25 30 25 51 STRAND 52 25 57 COLOUR_TEXT_REGION 52 25 57 25 51 STRAND 77 25 84 COLOUR_TEXT_REGION 77 25 84 25 51 STRAND 98 25 108 COLOUR_TEXT_REGION 98 25 108 25 51 STRAND 113 25 116 COLOUR_TEXT_REGION 113 25 116 25 51 STRAND 121 25 124 COLOUR_TEXT_REGION 121 25 124 25 51 HELIX 38 25 51 COLOUR_TEXT_REGION 38 25 51 25 50 HELIX 60 25 73 COLOUR_TEXT_REGION 60 25 73 25 50 HELIX 137 25 141 COLOUR_TEXT_REGION 137 25 141 25 50 STRAND 9 26 13 COLOUR_TEXT_REGION 9 26 13 26 51 STRAND 20 26 25 COLOUR_TEXT_REGION 20 26 25 26 51 STRAND 52 26 67 COLOUR_TEXT_REGION 52 26 67 26 51 STRAND 77 26 84 COLOUR_TEXT_REGION 77 26 84 26 51 STRAND 100 26 106 COLOUR_TEXT_REGION 100 26 106 26 51 STRAND 113 26 116 COLOUR_TEXT_REGION 113 26 116 26 51 STRAND 120 26 124 COLOUR_TEXT_REGION 120 26 124 26 51 STRAND 137 26 137 COLOUR_TEXT_REGION 137 26 137 26 51 HELIX 38 26 48 COLOUR_TEXT_REGION 38 26 48 26 50 HELIX 51 26 51 COLOUR_TEXT_REGION 51 26 51 26 50 HELIX 68 26 70 COLOUR_TEXT_REGION 68 26 70 26 50 HELIX 92 26 99 COLOUR_TEXT_REGION 92 26 99 26 50 HELIX 136 26 136 COLOUR_TEXT_REGION 136 26 136 26 50