QUERY           : DDWEVPTATWNMVGCDQNGKVSQQISNTISFSSTVTAGVAVEVSSTIEKGVIFAKATVSVKVTASLSKAWTNSQSGTTAITYTCDNYDSDEEFTRGCMWQLAIETTEVKSGDLLVWNPQIVKCTRSNTAPGCAPFTKCANEDCTFCTDI : QUERY 
UniRef90_B7T136 : -DWLTPTADWHMVGCNQNGQVTQEISNEISYSTTESETSTVEITAAIEAETLFGSVSLSASTSYSLSKEWTRSQSQTRAITFTCENYDSGKPFVRGCMWQLEVTTKERHAENAMRWTPQIVKCTRNQGQPKCPPFTRCMDEDCTRCEEL : UniRef90_B7T136
UniRef90_J9IEF7 : --------QWERVSSGSG-SLSHSIEKGWSKDIVQKEESTVEFTATMESGFNFEKTTLSNHVSINIFKSSQRSQSKITIDTVTCDNKNGDLV----ALYQWTLTGTQEGENDIYVQDSNFI-CRNSNSGPDC-PLTMCADAECTKCTG- : UniRef90_J9IEF7
UniRef90_J9IUL9 : --------QWERVS-SGSGTITHVIQKGWSKDIVQKDTVLEEFTATAEAGFNFEKTTLTNHISLNIFSSCQRSQSKITTDTVVCDNPERQLV----ALYQWTLTGTQDGENDIYIQDANYI-CRNSNTGPAC-PLTMCADAQCTQCTG- : UniRef90_J9IUL9
UniRef90_J9I4T7 : --------QWTRVT-SGSGPITYTIQTGWSKDEVKKDTVLEEFTSVLEAGWSFAKTTLTNHVSVNIFKSVEQSQSQLQTIAVTCDNPERDLV----ALYQWTLQGQTNGQDDVFVRDSNYI-CRNANSAPAC-PLTMCANGQCTECTD- : UniRef90_J9I4T7
UniRef90_J9I7S4 : ---------WERV-ISSNGPITETIEVGWSKSKTDETTVTNSFTTSAEEGYSFSKVTLSYTLSTSIRNSVTQSLSISKRITVSCNNPNNELV----TLYQWVLNGERIGEPNIKVDDSNFI-CRNANSSPAC-PLTMCADSQCNTCTG- : UniRef90_J9I7S4
UniRef90_J9J4W0 : ---------WERVA-SQNGPIVKTIEVGWSNEESQIDQNTVKFTASANKGYIFSKFSLSKDQSGSIRDSVMQALQTSKKIHMTCSNLNNESV----SLYQWVLVGEGVGESSIHVRDSSYI-CRNANSSPAC-PLTMCADSQCSTCIE- : UniRef90_J9J4W0
UniRef90_J9HT25 : DIFAVIVGKWERVVSTNFAPINTTIYRGWDQSEVQIPELTIAWGNSFQFQAEFEKTTLTRPASVKIFDATIRSESKISEVQVTCP-YNSKANQDNIALYQWTFTVKIDGLEDFYVYDANYM-CRYRDSPPAC-PLTYCANSDCSSCT-- : UniRef90_J9HT25
UniRef90_J9HYZ3 : --------KWERVMSTTYAPINTTVSMGWSIETQIPESNLLNLTEAWQQGFEFEKTTMTIPASVKLFDASTLKQSQITQVQASCP-ADAKLSQNTIALYQWTYKVQIDGKEEFQIYDANFV-CKYNNTAPAC-PLLYCADADCQNCLD- : UniRef90_J9HYZ3
UniRef90_J9ISV3 : ---VVIVGKWERVTSANIGPLNTTIQRGWDQDTLLKLFRTEAWKEAYSFQTEFDKTTLTIPASVKAFDSTIKSQSKIIDIQANCAIKQGQDNI---ALYQWTYKVQIEGLDEFYVYDANYM-CRYSASPPAC-PLNYCATSDCTTC--- : UniRef90_J9ISV3
UniRef90_J9IMI9 : --------QWELAAY-GNGLLSRSIETTVQDQTIHESIVKDSFVVSAEAGYEFAKTSMTTETSRTIFCMKYYEKTTKTTTTFTCENKDGQLV----GLYQWSMKSSA-GDQAIAGINTEFYLCRDANSQPHC-PLTQCRDANCNEC--- : UniRef90_J9IMI9
UniRef90_J9J4G6 : --------KWERVTSSNTGPLITTIQRGWDQKEVNEDTLLNLFKTQAELGYIFQRSSMTTYASIRIFDSTIESSSKISETDASCDIKSGQDYI---ALYQWTYKVSIVGQEDFYVYDTNQI-CRYAKNPPSCA-LNYCATFDCTTC--- : UniRef90_J9J4G6
UniRef90_J9J4C3 : --------QWERVMSSNTGLLNTTIQRGWDKKEANIPEVALLFKSQADKGTEFDKISLTMEPCIRLFEATIKSQSKISEVKANCGIKSGQQNI---ALYQWTYKVQIEGLDVFYVYDANYM-CRYGESSPACP---------------- : UniRef90_J9J4C3

                : 1---------11--------21--------31--------41--------51--------61--------71--------81--------91--------101-------111-------121-------131-------141------ :
OrigSeq         : DDWEVPTATWNMVGCDQNGKVSQQISNTISFSSTVTAGVAVEVSSTIEKGVIFAKATVSVKVTASLSKAWTNSQSGTTAITYTCDNYDSDEEFTRGCMWQLAIETTEVKSGDLLVWNPQIVKCTRSNTAPGCAPFTKCANEDCTFCTDI : OrigSeq

Jnet            : ---EEEE--EEEEE-----EEEEEEEEE---------HHHHHHHHHHHHHHEEEEEEE-HHHHHHHHHHHHH----EEEEEEEE-------HHHHHHEEEEEEEEEEE----EEEE---EEEEE------------HHH---------- : Jnet
jhmm            : --EEEEEE-EEEEEE----EEEEEEEEEEE-------HHHHHHHHHHHHHHEEEEEE--HHHHHHHHHHHHHH---EEEEEEEE-------------EEEEEEEEEEE----EEEE----EEEE------------HHHHH-------- : jhmm
jpssm           : --------EEEEE------EEEEEE------------HHHHHHHHHHH--HEEEEEEEEEEEEEEEEHHH------EEEEEEEE-------HHHHHHHHEEEEEEE------EEEE---EEEEE-----------HE------------ : jpssm

Lupas 14        : ----------------------------------------------------------------------------------------------------------------------------------------------------- : Lupas 14
Lupas 21        : ----------------------------------------------------------------------------------------------------------------------------------------------------- : Lupas 21
Lupas 28        : ----------------------------------------------------------------------------------------------------------------------------------------------------- : Lupas 28

Jnet_25         : --B---BB-B-BBBB---B-BB--B---B----B----BB--BBBBB---B-B--BBB---BBB-BB--B------B--B-BBB-B------BBBBBBBBBBB-B-------BBB-BB-BB-B--------B-BBB-BB---B--B--- : Jnet_25
Jnet_5          : ------------B-------B---B-----------------B--------------B----B--B---------------B-B------------BBB-B-------------------B-B--------B--B--B-------B--- : Jnet_5
Jnet_0          : ------------------------------------------------------------------------------------------------BB--------------------------------------------------- : Jnet_0
Jnet Rel        : 98031100068722188735765423201387535512799999987532112325711001112341313126745889988547887630331111302456504268736885475188714777777765012210276401689 : Jnet Rel

Notes
Key:
Colour code for alignment:
Blue            - Complete identity at a position
Shades of red   - The more red a position is, the higher the level of
                  conservation of chemical properties of the amino acids
Jnet            - Final secondary structure prediction for query
jalign          - Jnet alignment prediction
jhmm            - Jnet hmm profile prediction
jpssm           - Jnet PSIBLAST pssm profile prediction

Lupas           - Lupas Coil prediction (window size of 14, 21 and 28)

Note on coiled coil predictions  - = less than 50% probability
                                 c = between 50% and 90% probability
                                 C = greater than 90% probability

Jnet_25         - Jnet prediction of burial, less than 25% solvent accesibility
Jnet_5          - Jnet prediction of burial, less than 5% exposure
Jnet_0          - Jnet prediction of burial, 0% exposure
Jnet Rel        - Jnet reliability of prediction accuracy, ranges from 0 to 9, bigger is better.