SILENT_MODE BLOCK_FILE jp_FCfDtO9.concise.blc MAX_NSEQ 950 MAX_INPUT_LEN 952 OUTPUT_FILE jp_FCfDtO9.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 237 939 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 940 237 949 H SPACE SUB_CHARS 1 940 237 949 E SPACE SUB_CHARS 1 940 237 949 - SPACE STRAND 3 943 21 COLOUR_TEXT_REGION 3 943 21 943 51 STRAND 25 943 30 COLOUR_TEXT_REGION 25 943 30 943 51 STRAND 37 943 39 COLOUR_TEXT_REGION 37 943 39 943 51 STRAND 42 943 46 COLOUR_TEXT_REGION 42 943 46 943 51 STRAND 110 943 114 COLOUR_TEXT_REGION 110 943 114 943 51 STRAND 120 943 123 COLOUR_TEXT_REGION 120 943 123 943 51 STRAND 130 943 131 COLOUR_TEXT_REGION 130 943 131 943 51 STRAND 138 943 142 COLOUR_TEXT_REGION 138 943 142 943 51 STRAND 148 943 153 COLOUR_TEXT_REGION 148 943 153 943 51 STRAND 180 943 185 COLOUR_TEXT_REGION 180 943 185 943 51 STRAND 193 943 200 COLOUR_TEXT_REGION 193 943 200 943 51 STRAND 210 943 217 COLOUR_TEXT_REGION 210 943 217 943 51 STRAND 229 943 235 COLOUR_TEXT_REGION 229 943 235 943 51 HELIX 50 943 78 COLOUR_TEXT_REGION 50 943 78 943 50 HELIX 80 943 106 COLOUR_TEXT_REGION 80 943 106 943 50 HELIX 157 943 169 COLOUR_TEXT_REGION 157 943 169 943 50 STRAND 3 948 12 COLOUR_TEXT_REGION 3 948 12 948 51 STRAND 14 948 22 COLOUR_TEXT_REGION 14 948 22 948 51 STRAND 25 948 30 COLOUR_TEXT_REGION 25 948 30 948 51 STRAND 42 948 46 COLOUR_TEXT_REGION 42 948 46 948 51 STRAND 110 948 114 COLOUR_TEXT_REGION 110 948 114 948 51 STRAND 119 948 124 COLOUR_TEXT_REGION 119 948 124 948 51 STRAND 130 948 131 COLOUR_TEXT_REGION 130 948 131 948 51 STRAND 138 948 142 COLOUR_TEXT_REGION 138 948 142 948 51 STRAND 147 948 154 COLOUR_TEXT_REGION 147 948 154 948 51 STRAND 180 948 185 COLOUR_TEXT_REGION 180 948 185 948 51 STRAND 193 948 200 COLOUR_TEXT_REGION 193 948 200 948 51 STRAND 210 948 217 COLOUR_TEXT_REGION 210 948 217 948 51 STRAND 229 948 235 COLOUR_TEXT_REGION 229 948 235 948 51 HELIX 49 948 78 COLOUR_TEXT_REGION 49 948 78 948 50 HELIX 80 948 106 COLOUR_TEXT_REGION 80 948 106 948 50 HELIX 157 948 167 COLOUR_TEXT_REGION 157 948 167 948 50 STRAND 3 949 20 COLOUR_TEXT_REGION 3 949 20 949 51 STRAND 25 949 30 COLOUR_TEXT_REGION 25 949 30 949 51 STRAND 36 949 39 COLOUR_TEXT_REGION 36 949 39 949 51 STRAND 42 949 46 COLOUR_TEXT_REGION 42 949 46 949 51 STRAND 111 949 113 COLOUR_TEXT_REGION 111 949 113 949 51 STRAND 130 949 130 COLOUR_TEXT_REGION 130 949 130 949 51 STRAND 139 949 142 COLOUR_TEXT_REGION 139 949 142 949 51 STRAND 149 949 152 COLOUR_TEXT_REGION 149 949 152 949 51 STRAND 180 949 185 COLOUR_TEXT_REGION 180 949 185 949 51 STRAND 193 949 200 COLOUR_TEXT_REGION 193 949 200 949 51 STRAND 210 949 218 COLOUR_TEXT_REGION 210 949 218 949 51 STRAND 229 949 235 COLOUR_TEXT_REGION 229 949 235 949 51 HELIX 52 949 68 COLOUR_TEXT_REGION 52 949 68 949 50 HELIX 88 949 94 COLOUR_TEXT_REGION 88 949 94 949 50 HELIX 97 949 106 COLOUR_TEXT_REGION 97 949 106 949 50 HELIX 157 949 170 COLOUR_TEXT_REGION 157 949 170 949 50