SILENT_MODE BLOCK_FILE jp_9mhBuzF.concise.blc MAX_NSEQ 741 MAX_INPUT_LEN 743 OUTPUT_FILE jp_9mhBuzF.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 193 730 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 731 193 740 H SPACE SUB_CHARS 1 731 193 740 E SPACE SUB_CHARS 1 731 193 740 - SPACE STRAND 30 734 34 COLOUR_TEXT_REGION 30 734 34 734 51 STRAND 40 734 40 COLOUR_TEXT_REGION 40 734 40 734 51 STRAND 65 734 70 COLOUR_TEXT_REGION 65 734 70 734 51 STRAND 113 734 117 COLOUR_TEXT_REGION 113 734 117 734 51 STRAND 136 734 140 COLOUR_TEXT_REGION 136 734 140 734 51 STRAND 150 734 153 COLOUR_TEXT_REGION 150 734 153 734 51 HELIX 8 734 15 COLOUR_TEXT_REGION 8 734 15 734 50 HELIX 44 734 60 COLOUR_TEXT_REGION 44 734 60 734 50 HELIX 75 734 86 COLOUR_TEXT_REGION 75 734 86 734 50 HELIX 97 734 97 COLOUR_TEXT_REGION 97 734 97 734 50 HELIX 125 734 130 COLOUR_TEXT_REGION 125 734 130 734 50 HELIX 159 734 178 COLOUR_TEXT_REGION 159 734 178 734 50 HELIX 188 734 190 COLOUR_TEXT_REGION 188 734 190 734 50 STRAND 31 739 34 COLOUR_TEXT_REGION 31 739 34 739 51 STRAND 39 739 42 COLOUR_TEXT_REGION 39 739 42 739 51 STRAND 65 739 70 COLOUR_TEXT_REGION 65 739 70 739 51 STRAND 113 739 117 COLOUR_TEXT_REGION 113 739 117 739 51 STRAND 136 739 140 COLOUR_TEXT_REGION 136 739 140 739 51 STRAND 149 739 154 COLOUR_TEXT_REGION 149 739 154 739 51 HELIX 8 739 14 COLOUR_TEXT_REGION 8 739 14 739 50 HELIX 44 739 60 COLOUR_TEXT_REGION 44 739 60 739 50 HELIX 75 739 86 COLOUR_TEXT_REGION 75 739 86 739 50 HELIX 124 739 131 COLOUR_TEXT_REGION 124 739 131 739 50 HELIX 159 739 178 COLOUR_TEXT_REGION 159 739 178 739 50 HELIX 188 739 190 COLOUR_TEXT_REGION 188 739 190 739 50 STRAND 29 740 33 COLOUR_TEXT_REGION 29 740 33 740 51 STRAND 65 740 70 COLOUR_TEXT_REGION 65 740 70 740 51 STRAND 114 740 116 COLOUR_TEXT_REGION 114 740 116 740 51 STRAND 137 740 141 COLOUR_TEXT_REGION 137 740 141 740 51 HELIX 8 740 17 COLOUR_TEXT_REGION 8 740 17 740 50 HELIX 44 740 61 COLOUR_TEXT_REGION 44 740 61 740 50 HELIX 75 740 87 COLOUR_TEXT_REGION 75 740 87 740 50 HELIX 91 740 99 COLOUR_TEXT_REGION 91 740 99 740 50 HELIX 107 740 111 COLOUR_TEXT_REGION 107 740 111 740 50 HELIX 113 740 113 COLOUR_TEXT_REGION 113 740 113 740 50 HELIX 159 740 178 COLOUR_TEXT_REGION 159 740 178 740 50 HELIX 186 740 189 COLOUR_TEXT_REGION 186 740 189 740 50