JALVIEW_ANNOTATION # Created by concise2jalview using 'jp_jYDpykY.concise' as input NO_GRAPH Lupas_21 Coiled-coil prediction windowed over 21 residues -|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|- NO_GRAPH Lupas_14 Coiled-coil prediction windowed over 14 residues -|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|- NO_GRAPH Lupas_28 Coiled-coil prediction windowed over 28 residues -|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|- NO_GRAPH jnetpred Final secondary structure prediction by Jnet |||||||||||||||||||||||H|H|H|H|H|H|H|H|H|H|H|H|H||||||||E|E|E|E|E||||||E|E|E|E|E|E|H|H|H|H|H|H|H|H|H|H|H|||||||E|E|E|E|E|||H|H|H|H|H|H|H|H|H|H|H|H|H|H||||H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H||||H|H|H|H|H|H|H|H|||||H|H|H|H|H|H|H|H|H|||||H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H||||H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|||||H|H|H|H|H|H|H|H|H|H|H||||||||||||||||||||||||||| BAR_GRAPH JNETCONF Confidence of Jnet prediction 0 (low) -> 9 (high) 9|9|8|1|0|1|3|3|3|2|1|3|6|7|7|7|7|7|7|7|6|5|2|7|8|9|9|9|9|9|9|9|9|8|7|5|2|7|7|6|6|7|4|5|8|8|9|7|1|6|8|8|7|0|6|7|6|2|1|0|1|9|9|9|9|9|9|8|8|5|2|7|8|8|7|1|6|8|8|7|3|5|7|5|8|8|9|9|9|9|9|8|7|3|2|6|1|1|4|1|2|9|9|9|9|9|9|9|8|6|2|1|1|7|9|9|9|9|9|9|9|2|1|3|2|7|9|9|8|8|8|7|3|4|8|8|8|0|3|4|4|4|4|3|2|3|1|3|3|1|7|9|9|9|9|8|7|3|1|0|8|9|9|9|9|9|8|7|4|3|5|4|6|8|9|9|9|9|8|7|3|1|2|8|9|9|9|9|8|1|4|6|8|6|5|8|9|9|9|9|9|8|8|5|2|6|7|7|7|7|6|6|6|6|6|6|6|6|7|7|7|7|7|7|6|4|1|1|4|7|8|9 NO_GRAPH JNETSOL25 Jnet solvent relative accessibility prediction at 25% cut-off -|-|B|-|-|B|-|B|-|-|B|-|-|-|-|-|B|B|B|-|-|B|-|-|-|-|B|-|-|B|B|-|-|B|-|-|B|-|B|B|-|-|B|B|B|B|B|-|-|-|-|-|-|-|B|B|B|B|B|B|B|B|B|B|B|B|B|-|-|B|-|B|-|-|B|B|B|B|B|B|-|B|-|-|-|-|B|B|B|B|B|B|B|-|B|B|-|-|-|B|-|-|B|B|-|B|B|B|B|-|-|B|-|-|B|B|-|-|-|-|-|-|-|B|-|B|-|-|B|B|-|-|B|-|-|-|-|-|B|B|B|-|-|B|B|-|B|-|-|B|B|-|-|B|B|-|-|B|-|-|-|-|-|B|B|B|B|B|B|-|B|-|-|-|B|B|-|B|B|-|-|-|-|B|B|B|B|B|B|-|-|-|B|B|B|-|B|B|B|-|B|B|-|-|-|-|-|-|-|-|-|B|-|-|-|-|B|-|-|-|B|-|-|B|-|B|-|B|-|-|B|- NO_GRAPH JNETSOL5 Jnet solvent relative accessibility prediction at 5% cut-off -|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|B|-|-|-|B|-|-|-|-|-|-|-|-|B|B|-|B|-|-|-|-|-|-|-|-|B|-|B|B|B|B|-|-|B|B|-|B|B|-|-|-|-|-|-|-|B|-|B|-|B|-|-|-|-|-|-|-|B|-|B|-|B|-|-|-|-|-|-|-|-|-|-|-|B|-|-|-|-|-|-|-|-|B|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|B|B|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|B|B|-|-|B|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|B|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|- NO_GRAPH JNETSOL0 Jnet solvent relative accessibility prediction at 0% cut-off -|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|B|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|B|-|-|-|-|-|B|-|-|B|B|-|-|-|-|-|-|-|B|-|B|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|B|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|B|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|- NO_GRAPH JNETHMM Jnet prediction using HMMer profiles |||E|E|||||||||||||||||||H|H|H|H|H|H|H|H|H|H|H|H|H||||||||E|E|E|E|E||||||E|E|E|E|E|E|||H|H|H|H|H|H|H|H|H|||||||E|E|E|E|E|||H|H|H|H|H|H|H|H|H|H|H|H|H||||||H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|||||H|H|H|H|H|H|H|H|||||H|H|H|H|H|H|H|H|H|||||H|H|H|H|H|H|H|H|H||H|H|H|H|H|H|H|H|H||||H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H||||||H|H|H|H|H|H|H|H|H|H|H||||||||||||||||||||||||||| NO_GRAPH JNETPSSM Jnet prediction using PSSM profiles ||||||E|E|E|E|E|||||||||||||H|H|H|H|H|H|H|H|H|H|H|H|H||||||||E|E|E|E|E|E|||||E|E|E|E|E|H|H|H|H|H|H|H|H|H|H|H|H|||||||E|E|E|E|E|||H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H||||||E|E|||||H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H||||H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H||||H|H|H|H|H|H|H|H|H|H|||||||||||||||||||||||||||| NO_GRAPH JNETJURY Positions where Jnet predictions do not agree | | |*|*| |*|*|*|*|*| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | |*| | | | | | | | | |*|*|*| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | |*|*|*|*|*| | | | | | | | | | | | | | | | | | | | |*|*|*|*| | | | | | | | | | | | |*|*|*|*|*|*|*| | |*|*|*|*| | | | | | | | | |*| | | | | | | | | | | | | | | | | | | | | | | | | | | | | |*|*| | | | | | | | | | | | | |*| | | | | | | | | | | | | | | | | | | | | | | | | | |