SILENT_MODE BLOCK_FILE jp_9W7escQ.concise.blc MAX_NSEQ 470 MAX_INPUT_LEN 472 OUTPUT_FILE jp_9W7escQ.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 172 459 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 460 172 469 H SPACE SUB_CHARS 1 460 172 469 E SPACE SUB_CHARS 1 460 172 469 - SPACE STRAND 22 463 27 COLOUR_TEXT_REGION 22 463 27 463 51 STRAND 47 463 52 COLOUR_TEXT_REGION 47 463 52 463 51 STRAND 74 463 77 COLOUR_TEXT_REGION 74 463 77 463 51 STRAND 93 463 95 COLOUR_TEXT_REGION 93 463 95 463 51 STRAND 119 463 122 COLOUR_TEXT_REGION 119 463 122 463 51 STRAND 140 463 142 COLOUR_TEXT_REGION 140 463 142 463 51 STRAND 162 463 164 COLOUR_TEXT_REGION 162 463 164 463 51 HELIX 5 463 16 COLOUR_TEXT_REGION 5 463 16 463 50 HELIX 33 463 42 COLOUR_TEXT_REGION 33 463 42 463 50 HELIX 61 463 69 COLOUR_TEXT_REGION 61 463 69 463 50 HELIX 80 463 88 COLOUR_TEXT_REGION 80 463 88 463 50 HELIX 96 463 114 COLOUR_TEXT_REGION 96 463 114 463 50 HELIX 128 463 135 COLOUR_TEXT_REGION 128 463 135 463 50 HELIX 149 463 157 COLOUR_TEXT_REGION 149 463 157 463 50 STRAND 22 468 27 COLOUR_TEXT_REGION 22 468 27 468 51 STRAND 47 468 51 COLOUR_TEXT_REGION 47 468 51 468 51 STRAND 74 468 77 COLOUR_TEXT_REGION 74 468 77 468 51 STRAND 93 468 96 COLOUR_TEXT_REGION 93 468 96 468 51 STRAND 119 468 122 COLOUR_TEXT_REGION 119 468 122 468 51 STRAND 140 468 142 COLOUR_TEXT_REGION 140 468 142 468 51 STRAND 162 468 164 COLOUR_TEXT_REGION 162 468 164 468 51 HELIX 5 468 6 COLOUR_TEXT_REGION 5 468 6 468 50 HELIX 9 468 16 COLOUR_TEXT_REGION 9 468 16 468 50 HELIX 33 468 42 COLOUR_TEXT_REGION 33 468 42 468 50 HELIX 61 468 69 COLOUR_TEXT_REGION 61 468 69 468 50 HELIX 80 468 88 COLOUR_TEXT_REGION 80 468 88 468 50 HELIX 97 468 114 COLOUR_TEXT_REGION 97 468 114 468 50 HELIX 129 468 135 COLOUR_TEXT_REGION 129 468 135 468 50 HELIX 149 468 157 COLOUR_TEXT_REGION 149 468 157 468 50 STRAND 22 469 26 COLOUR_TEXT_REGION 22 469 26 469 51 STRAND 47 469 52 COLOUR_TEXT_REGION 47 469 52 469 51 STRAND 74 469 76 COLOUR_TEXT_REGION 74 469 76 469 51 STRAND 119 469 121 COLOUR_TEXT_REGION 119 469 121 469 51 STRAND 141 469 142 COLOUR_TEXT_REGION 141 469 142 469 51 STRAND 161 469 164 COLOUR_TEXT_REGION 161 469 164 469 51 HELIX 5 469 16 COLOUR_TEXT_REGION 5 469 16 469 50 HELIX 31 469 42 COLOUR_TEXT_REGION 31 469 42 469 50 HELIX 61 469 69 COLOUR_TEXT_REGION 61 469 69 469 50 HELIX 80 469 88 COLOUR_TEXT_REGION 80 469 88 469 50 HELIX 93 469 114 COLOUR_TEXT_REGION 93 469 114 469 50 HELIX 127 469 136 COLOUR_TEXT_REGION 127 469 136 469 50 HELIX 149 469 157 COLOUR_TEXT_REGION 149 469 157 469 50