SILENT_MODE BLOCK_FILE jp_HIBAu4E.concise.blc MAX_NSEQ 667 MAX_INPUT_LEN 669 OUTPUT_FILE jp_HIBAu4E.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 291 656 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 657 291 666 H SPACE SUB_CHARS 1 657 291 666 E SPACE SUB_CHARS 1 657 291 666 - SPACE STRAND 21 660 25 COLOUR_TEXT_REGION 21 660 25 660 51 STRAND 56 660 62 COLOUR_TEXT_REGION 56 660 62 660 51 STRAND 65 660 68 COLOUR_TEXT_REGION 65 660 68 660 51 STRAND 84 660 86 COLOUR_TEXT_REGION 84 660 86 660 51 STRAND 119 660 122 COLOUR_TEXT_REGION 119 660 122 660 51 STRAND 148 660 151 COLOUR_TEXT_REGION 148 660 151 660 51 STRAND 174 660 178 COLOUR_TEXT_REGION 174 660 178 660 51 STRAND 184 660 186 COLOUR_TEXT_REGION 184 660 186 660 51 STRAND 219 660 222 COLOUR_TEXT_REGION 219 660 222 660 51 HELIX 9 660 16 COLOUR_TEXT_REGION 9 660 16 660 50 HELIX 38 660 51 COLOUR_TEXT_REGION 38 660 51 660 50 HELIX 72 660 79 COLOUR_TEXT_REGION 72 660 79 660 50 HELIX 91 660 96 COLOUR_TEXT_REGION 91 660 96 660 50 HELIX 102 660 114 COLOUR_TEXT_REGION 102 660 114 660 50 HELIX 135 660 142 COLOUR_TEXT_REGION 135 660 142 660 50 HELIX 160 660 169 COLOUR_TEXT_REGION 160 660 169 660 50 HELIX 200 660 212 COLOUR_TEXT_REGION 200 660 212 660 50 HELIX 233 660 247 COLOUR_TEXT_REGION 233 660 247 660 50 HELIX 252 660 263 COLOUR_TEXT_REGION 252 660 263 660 50 HELIX 267 660 289 COLOUR_TEXT_REGION 267 660 289 660 50 STRAND 4 665 7 COLOUR_TEXT_REGION 4 665 7 665 51 STRAND 21 665 24 COLOUR_TEXT_REGION 21 665 24 665 51 STRAND 56 665 62 COLOUR_TEXT_REGION 56 665 62 665 51 STRAND 65 665 68 COLOUR_TEXT_REGION 65 665 68 665 51 STRAND 84 665 86 COLOUR_TEXT_REGION 84 665 86 665 51 STRAND 119 665 122 COLOUR_TEXT_REGION 119 665 122 665 51 STRAND 148 665 151 COLOUR_TEXT_REGION 148 665 151 665 51 STRAND 174 665 178 COLOUR_TEXT_REGION 174 665 178 665 51 STRAND 184 665 187 COLOUR_TEXT_REGION 184 665 187 665 51 STRAND 219 665 222 COLOUR_TEXT_REGION 219 665 222 665 51 HELIX 9 665 16 COLOUR_TEXT_REGION 9 665 16 665 50 HELIX 25 665 29 COLOUR_TEXT_REGION 25 665 29 665 50 HELIX 38 665 51 COLOUR_TEXT_REGION 38 665 51 665 50 HELIX 72 665 79 COLOUR_TEXT_REGION 72 665 79 665 50 HELIX 91 665 96 COLOUR_TEXT_REGION 91 665 96 665 50 HELIX 102 665 114 COLOUR_TEXT_REGION 102 665 114 665 50 HELIX 135 665 143 COLOUR_TEXT_REGION 135 665 143 665 50 HELIX 160 665 169 COLOUR_TEXT_REGION 160 665 169 665 50 HELIX 200 665 212 COLOUR_TEXT_REGION 200 665 212 665 50 HELIX 233 665 246 COLOUR_TEXT_REGION 233 665 246 665 50 HELIX 252 665 263 COLOUR_TEXT_REGION 252 665 263 665 50 HELIX 267 665 289 COLOUR_TEXT_REGION 267 665 289 665 50 STRAND 21 666 25 COLOUR_TEXT_REGION 21 666 25 666 51 STRAND 57 666 62 COLOUR_TEXT_REGION 57 666 62 666 51 STRAND 65 666 68 COLOUR_TEXT_REGION 65 666 68 666 51 STRAND 119 666 121 COLOUR_TEXT_REGION 119 666 121 666 51 STRAND 147 666 151 COLOUR_TEXT_REGION 147 666 151 666 51 STRAND 173 666 177 COLOUR_TEXT_REGION 173 666 177 666 51 STRAND 219 666 222 COLOUR_TEXT_REGION 219 666 222 666 51 HELIX 8 666 16 COLOUR_TEXT_REGION 8 666 16 666 50 HELIX 37 666 51 COLOUR_TEXT_REGION 37 666 51 666 50 HELIX 72 666 79 COLOUR_TEXT_REGION 72 666 79 666 50 HELIX 83 666 86 COLOUR_TEXT_REGION 83 666 86 666 50 HELIX 91 666 96 COLOUR_TEXT_REGION 91 666 96 666 50 HELIX 103 666 115 COLOUR_TEXT_REGION 103 666 115 666 50 HELIX 139 666 141 COLOUR_TEXT_REGION 139 666 141 666 50 HELIX 160 666 169 COLOUR_TEXT_REGION 160 666 169 666 50 HELIX 200 666 212 COLOUR_TEXT_REGION 200 666 212 666 50 HELIX 233 666 248 COLOUR_TEXT_REGION 233 666 248 666 50 HELIX 253 666 263 COLOUR_TEXT_REGION 253 666 263 666 50 HELIX 267 666 289 COLOUR_TEXT_REGION 267 666 289 666 50