SILENT_MODE BLOCK_FILE jp_9x9Zd84.concise.blc MAX_NSEQ 909 MAX_INPUT_LEN 911 OUTPUT_FILE jp_9x9Zd84.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 163 898 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 899 163 908 H SPACE SUB_CHARS 1 899 163 908 E SPACE SUB_CHARS 1 899 163 908 - SPACE STRAND 7 902 9 COLOUR_TEXT_REGION 7 902 9 902 51 STRAND 32 902 38 COLOUR_TEXT_REGION 32 902 38 902 51 STRAND 53 902 57 COLOUR_TEXT_REGION 53 902 57 902 51 STRAND 77 902 78 COLOUR_TEXT_REGION 77 902 78 902 51 STRAND 83 902 91 COLOUR_TEXT_REGION 83 902 91 902 51 STRAND 106 902 110 COLOUR_TEXT_REGION 106 902 110 902 51 STRAND 137 902 143 COLOUR_TEXT_REGION 137 902 143 902 51 STRAND 157 902 161 COLOUR_TEXT_REGION 157 902 161 902 51 STRAND 33 907 39 COLOUR_TEXT_REGION 33 907 39 907 51 STRAND 53 907 56 COLOUR_TEXT_REGION 53 907 56 907 51 STRAND 83 907 90 COLOUR_TEXT_REGION 83 907 90 907 51 STRAND 106 907 109 COLOUR_TEXT_REGION 106 907 109 907 51 STRAND 138 907 143 COLOUR_TEXT_REGION 138 907 143 907 51 STRAND 157 907 161 COLOUR_TEXT_REGION 157 907 161 907 51 STRAND 6 908 11 COLOUR_TEXT_REGION 6 908 11 908 51 STRAND 31 908 37 COLOUR_TEXT_REGION 31 908 37 908 51 STRAND 52 908 57 COLOUR_TEXT_REGION 52 908 57 908 51 STRAND 62 908 64 COLOUR_TEXT_REGION 62 908 64 908 51 STRAND 77 908 78 COLOUR_TEXT_REGION 77 908 78 908 51 STRAND 84 908 92 COLOUR_TEXT_REGION 84 908 92 908 51 STRAND 105 908 110 COLOUR_TEXT_REGION 105 908 110 908 51 STRAND 115 908 117 COLOUR_TEXT_REGION 115 908 117 908 51 STRAND 136 908 143 COLOUR_TEXT_REGION 136 908 143 908 51 STRAND 158 908 161 COLOUR_TEXT_REGION 158 908 161 908 51