SILENT_MODE BLOCK_FILE jp_rXeQMXB.concise.blc MAX_NSEQ 140 MAX_INPUT_LEN 142 OUTPUT_FILE jp_rXeQMXB.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 190 129 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 130 190 139 H SPACE SUB_CHARS 1 130 190 139 E SPACE SUB_CHARS 1 130 190 139 - SPACE STRAND 3 133 10 COLOUR_TEXT_REGION 3 133 10 133 51 STRAND 35 133 39 COLOUR_TEXT_REGION 35 133 39 133 51 STRAND 58 133 63 COLOUR_TEXT_REGION 58 133 63 133 51 STRAND 89 133 93 COLOUR_TEXT_REGION 89 133 93 133 51 STRAND 130 133 133 COLOUR_TEXT_REGION 130 133 133 133 51 STRAND 150 133 154 COLOUR_TEXT_REGION 150 133 154 133 51 STRAND 161 133 167 COLOUR_TEXT_REGION 161 133 167 133 51 STRAND 175 133 184 COLOUR_TEXT_REGION 175 133 184 133 51 HELIX 17 133 30 COLOUR_TEXT_REGION 17 133 30 133 50 HELIX 43 133 53 COLOUR_TEXT_REGION 43 133 53 133 50 HELIX 77 133 85 COLOUR_TEXT_REGION 77 133 85 133 50 HELIX 100 133 106 COLOUR_TEXT_REGION 100 133 106 133 50 HELIX 113 133 125 COLOUR_TEXT_REGION 113 133 125 133 50 HELIX 134 133 141 COLOUR_TEXT_REGION 134 133 141 133 50 STRAND 3 138 10 COLOUR_TEXT_REGION 3 138 10 138 51 STRAND 35 138 39 COLOUR_TEXT_REGION 35 138 39 138 51 STRAND 58 138 63 COLOUR_TEXT_REGION 58 138 63 138 51 STRAND 89 138 93 COLOUR_TEXT_REGION 89 138 93 138 51 STRAND 130 138 135 COLOUR_TEXT_REGION 130 138 135 138 51 STRAND 150 138 154 COLOUR_TEXT_REGION 150 138 154 138 51 STRAND 161 138 167 COLOUR_TEXT_REGION 161 138 167 138 51 STRAND 177 138 184 COLOUR_TEXT_REGION 177 138 184 138 51 HELIX 15 138 30 COLOUR_TEXT_REGION 15 138 30 138 50 HELIX 43 138 53 COLOUR_TEXT_REGION 43 138 53 138 50 HELIX 77 138 85 COLOUR_TEXT_REGION 77 138 85 138 50 HELIX 100 138 107 COLOUR_TEXT_REGION 100 138 107 138 50 HELIX 113 138 125 COLOUR_TEXT_REGION 113 138 125 138 50 HELIX 136 138 141 COLOUR_TEXT_REGION 136 138 141 138 50 HELIX 176 138 176 COLOUR_TEXT_REGION 176 138 176 138 50 STRAND 4 139 9 COLOUR_TEXT_REGION 4 139 9 139 51 STRAND 35 139 39 COLOUR_TEXT_REGION 35 139 39 139 51 STRAND 57 139 63 COLOUR_TEXT_REGION 57 139 63 139 51 STRAND 89 139 93 COLOUR_TEXT_REGION 89 139 93 139 51 STRAND 150 139 154 COLOUR_TEXT_REGION 150 139 154 139 51 STRAND 162 139 168 COLOUR_TEXT_REGION 162 139 168 139 51 STRAND 174 139 184 COLOUR_TEXT_REGION 174 139 184 139 51 HELIX 17 139 30 COLOUR_TEXT_REGION 17 139 30 139 50 HELIX 44 139 52 COLOUR_TEXT_REGION 44 139 52 139 50 HELIX 77 139 85 COLOUR_TEXT_REGION 77 139 85 139 50 HELIX 100 139 105 COLOUR_TEXT_REGION 100 139 105 139 50 HELIX 114 139 125 COLOUR_TEXT_REGION 114 139 125 139 50 HELIX 131 139 140 COLOUR_TEXT_REGION 131 139 140 139 50