QUERY : GKKSKATKKRLAKLDNQNSRVPAWVMLKTDRRNHKRRHWRRNDTDE : QUERY
UniRef90_UPI0001D53B03 : SHKTFRIKQFLPEKQKENRPIPQWIQMKTNRYNSKRRHWRRTKL-- : UniRef90_UPI0001D53B03
UniRef90_J9IYK7 : SIKTFRKKVRLAKKIKQNRPMPNWIRYKTDRYNAKRRNWRRTKLK- : UniRef90_J9IYK7
UniRef90_L8WLC2 : SQKTFRTKRILAKAARQNRPLPQWFRLKTDQYNAKRRHWRR----- : UniRef90_L8WLC2
UniRef90_UPI00027FBE64 : SHKTFRIKRFLAKKQKQNCPIPQXIRMKTGRYNSK----------- : UniRef90_UPI00027FBE64
UniRef90_E5S598 : SHKTFRIKRKLAKAQRVNKPVPQWFRLRTGRYNVKRRHWRRTKLK- : UniRef90_E5S598
UniRef90_I1BWV2 : SQKSFITKVKLGKAKKQNRPLPHWFRLKSDRWNAKRRNWRHTKLN- : UniRef90_I1BWV2
UniRef90_V8NKC5 : SHKTFKIKRFLAKKQKQNRPIPQWIRMKTGNKIRSHRRFR------ : UniRef90_V8NKC5
UniRef90_B0E7I7 : GHKGFSYKLKLGKKIHQNRGVPQWFRMKTGNYNFKRRHWNRRKM-- : UniRef90_B0E7I7
UniRef90_UPI0001DEB61F : SHKTFRTKSFLAKKQKQNHPVPQWIQMKTGNKSSKRGHWR------ : UniRef90_UPI0001DEB61F
UniRef90_UPI0003D6E0C7 : SHKTFRIKRCLAKKQKQNRPIPQWTQMKTGDYNSKRRHWRRVEL-- : UniRef90_UPI0003D6E0C7
UniRef90_E3KCJ2 : SNKTFRVKRCLAKAQVQNRPIPQWCRLKTDTYNAKRRHWRRTKLN- : UniRef90_E3KCJ2
UniRef90_UPI00038BE8AA : SHKAFRINKFLTKKQKQNHSIPQWIQMETDRYNSKRRQWRKINL-- : UniRef90_UPI00038BE8AA
UniRef90_UPI0003ADFFD6 : AHKTFRIMRFMAKKQKQNCPVPQWVQMKTESGPTPRRDWRRTRL-- : UniRef90_UPI0003ADFFD6
UniRef90_U1NNI4 : GQKSKAQKKRLAKLDRQNRRVPTWVMMKTDMRNAKRRNWRRGDTDE : UniRef90_U1NNI4
UniRef90_UPI0003AEB4C0 : -------KQFLAKKQKQNHPIPQWIQMKTGRXNSKRKHWRRTKL-- : UniRef90_UPI0003AEB4C0
UniRef90_M1P2K2 : --------------ENQNSRVPAWVMLKTDRRNPKRRNWRRNDTDE : UniRef90_M1P2K2
UniRef90_J5JNR5 : SLKSFRTKQKLAKSQKQNRPVPQWIRLRTNRYNAKRRHWRKTKL-- : UniRef90_J5JNR5
UniRef90_UPI00022B5629 : SHKTFRIKRFMTKKQKQNRPVPQWIWVKTGRYNSKRRCWRRTKL-- : UniRef90_UPI00022B5629
UniRef90_A9V1L2 : --------MKLAKAARVNRPLPQWTRFKTGRYNAKRRRWRQTKL-- : UniRef90_A9V1L2
UniRef90_A0A059AZW3 : ------IKKKLAKKMRQNRPIPHWICMRTDRYNTKCRHWRRTKL-- : UniRef90_A0A059AZW3
UniRef90_A0D4U2 : AHKSLRMKKRLIKANKQNRPLPNWFRYRTDRYNSKRRHWRRTKLN- : UniRef90_A0D4U2
UniRef90_H3E5S3 : SHKTFIVKRTLAKAQKQNRPLPQWVRMKTG---------------- : UniRef90_H3E5S3
UniRef90_U5GEN5 : SHKTFRIKKKLAKKMRQNRPIPHWIRMRTD---------------- : UniRef90_U5GEN5
UniRef90_L9JEF5 : SHETFRIKQFLAETQKQNRPIPQWIRLVT----------------- : UniRef90_L9JEF5
UniRef90_J6F3Q6 : SQKSFIVKQKLAKKARQNRPIPQWFRLKTDRLYTTR---------- : UniRef90_J6F3Q6
UniRef90_UPI0001CE074A : SHKTFRIKRFLAKQQKQYHPIPQWIHIKTGRYNSKWRHFRRTNL-- : UniRef90_UPI0001CE074A
UniRef90_UPI00042AA49C : SRKTFRIKQCLAKKQKQNHPIPQWIRIKTGRYNSKRRHWR------ : UniRef90_UPI00042AA49C
UniRef90_UPI0003C12A64 : SHKTFRTKRFLAKNQEQSHPIPQRIRVKTNKYPSESRPWRRAKL-- : UniRef90_UPI0003C12A64
UniRef90_Q4N5K7 : SVRTLTLKKHLGKKMKQNRPIPHWFRLKTGRYNAKRRYWRRTKLK- : UniRef90_Q4N5K7
UniRef90_UPI000443C700 : SHKTFRIKSFLDKKQKQNLPISQWVQMKTVRYNSKRSHWRRTKL-- : UniRef90_UPI000443C700
UniRef90_C5LUC9 : SIKSFKTKRTLGKKIKQNRPLPQWFRMRTNRYNAKRRHWRRTKI-- : UniRef90_C5LUC9
UniRef90_M5EPZ4 : SQKSFRTKVKLAKAARQNRSIPNWFRMKTDQYNKNRRHWRRTKL-- : UniRef90_M5EPZ4
UniRef90_V7PUV0 : SIKTFRLKQRLGKCKKQNRPVPHWYRLRKDRYNTKRRHWRRTKL-- : UniRef90_V7PUV0
UniRef90_U6LEI3 : SIKGLNLKKRLGKKQKQNRTIPHWVRMKTDKYNNKRRHWRRTKL-- : UniRef90_U6LEI3
UniRef90_J4I826 : SQKTFRTKRILAKAARQNRPIPQWFRLKSDTK-------------- : UniRef90_J4I826
UniRef90_UPI00033443D4 : SHKTFRIKRFLVKKPKQSRPIPQWIRVKTGRYNSKRRQWRRTQL-- : UniRef90_UPI00033443D4
UniRef90_UPI00038EA672 : SHKTFRIKGFLANEQKQNRPIPPWIWMKTGRHNSKRRHWRRTEL-- : UniRef90_UPI00038EA672
UniRef90_R9AJ77 : AHKTFRLKRTLAKKQRQNRPIPQWFRLKSDQYNAKRRHWRRTKL-- : UniRef90_R9AJ77
UniRef90_UPI00006CB3D9 : ANKTLNMKKRFGRKIKQNRPLPNWYRYKSDRYNSKRRNWRRTKLK- : UniRef90_UPI00006CB3D9
UniRef90_UPI0002BCF811 : SHKTFRIKRFLAKKQKQNRPIPQWIQMKTGQYDSKRRHWRRTKL-- : UniRef90_UPI0002BCF811
UniRef90_B0R7X9 : GKKSKASKKRLAKLERQNSRVPAWVMMKTNRRNPKRRNWRRNDTDE : UniRef90_B0R7X9
UniRef90_UPI000333D2D8 : SHKTFRIKQFLAKKQKQNRPIPRWIRMKTSRHNSKRRCWRRIKL-- : UniRef90_UPI000333D2D8
UniRef90_UPI0003EBF1EE : SHKTFRIKRFLAKKQNQNRLIPQWFQMKTGRYSSKGRHWRRAKL-- : UniRef90_UPI0003EBF1EE
UniRef90_UPI00042C08E7 : SHKTFRIKRFLAKKQKQNCPIPPWVRMKTGRYNSKRQNWRRMKL-- : UniRef90_UPI00042C08E7
UniRef90_UPI0003C9031E : -HKTFRIKWLVANKQKQNRPIPQWIRMNTGRYNSKRRPWRRTTL-- : UniRef90_UPI0003C9031E
UniRef90_UPI0001E873FF : SHKTFRIKRCLAKKQKQNCPLPQWIQIKTGRYNTKRRHWIRTRL-- : UniRef90_UPI0001E873FF
UniRef90_UPI00022B73D3 : SHKTFRIKQFLMKKQKQNHSIPQWIQMKTGKYNSKRRHWRRTK--- : UniRef90_UPI00022B73D3
UniRef90_D2I6F5 : SHKTFRIKQFLAKKQKQNCPIPQWIQMKNGRHYSRRRHWRRTML-- : UniRef90_D2I6F5
UniRef90_UPI000332FFE3 : SHKTFRIKRFLAKKQKQNRPVPPWVQMKTNMYNSKKRNWRRTKL-- : UniRef90_UPI000332FFE3
UniRef90_D2HWD8 : SHKTFRIKQFLPKKQKQNQPTPQWIWIKIGRYNSKRRHWRRTQL-- : UniRef90_D2HWD8
UniRef90_F4B462 : --KPLAKKLRLAKALKSNSAIPAWVILKTNRINPLRRNWRRNSLK- : UniRef90_F4B462
UniRef90_UPI0001E86628 : SHKTFRIKQFLAKMQKQNRPILQWIRMKTGRYDWKGRHWRITKL-- : UniRef90_UPI0001E86628
UniRef90_E3PQW3 : ANKSFKIKQCLAKKQNQNRPIPQWVRMKTGRYNAKRRHWRRTKL-- : UniRef90_E3PQW3
UniRef90_F0WIT7 : SHKTFRVKKILAKKQRQNRPIPQWIRLCTDNK-------------- : UniRef90_F0WIT7
UniRef90_K1XAZ0 : SHKSFRTKVKLARAQKQNRPIPQWIRLRTG---------------- : UniRef90_K1XAZ0
UniRef90_L9L7P6 : ---TFRIKRFLTKKRKQNRLIRQWIQMKSDRYNAKRGPWRRITL-- : UniRef90_L9L7P6
UniRef90_P05767 : SHKSFRTKQKLAKAARQNRPIPQWIRLRTGNYNMKRRHWRRTKLN- : UniRef90_P05767
UniRef90_U3B6V0 : SYETFTIKQFLANKQKENRPISQWIQIKTGRYKPKKRHWRRTTL-- : UniRef90_U3B6V0
UniRef90_D8S367 : SHKTFRIKQKLGKKLRQNRPIPHWIRMRTNRYNAKRRHWRRTKL-- : UniRef90_D8S367
UniRef90_Q971I1 : -NKPLGRKLRLARALKSNSPVPAWVIIKTNRYNFHRRDWRRNDLK- : UniRef90_Q971I1
UniRef90_D7E713 : SHNSKGQKKRLAKAHKQNHRVPTWVIMKSNREHPKRRNWRRNDLK- : UniRef90_D7E713
UniRef90_Q28ZZ5 : AHKSFRIKQKLAKKLKQNRSVPQWVRLRTGRYNAKRRHWRRTKLK- : UniRef90_Q28ZZ5
UniRef90_G0VKD8 : AKKSFKTKQRLAKAQKQNRPLPQWIRLRTDRYNAKRRNWRRTKL-- : UniRef90_G0VKD8
UniRef90_P13005 : -HKSLGKKLRLGKALKRNSPIPAWVIIKTQRFNPLRRNWRRNNLK- : UniRef90_P13005
UniRef90_UPI0002235B2F : SHKAFRFKSFLAKKQKQNGFIPQWIRVKTGRYNSKRGHWRQIRLD- : UniRef90_UPI0002235B2F
UniRef90_A3CWZ6 : SKLMKGRKIRLAKACEQNRRVPAWVMIKTNRSHPKRRNWRRSSLK- : UniRef90_A3CWZ6
UniRef90_M1XMU2 : SHKTYLVKRVLAKKAKQNRPVPQWVRLRTGRYNAKRRHWRRTKI-- : UniRef90_M1XMU2
UniRef90_A8NQ57 : AHKTFIIKRKLAKKAKQNRPLPQWARMKTGRYNAKRRHWRRTKLK- : UniRef90_A8NQ57
UniRef90_D8J593 : ---------RLGKLDRQNSRIPAWVMLKTDRRNPKRRNWRRSDTDE : UniRef90_D8J593
UniRef90_S7QCG3 : SHKTFRIKRFLDKKQKQNRPIPNGFRWK------------------ : UniRef90_S7QCG3
UniRef90_UPI00045E5751 : --KTFRIKRFLAKKQKQNHPIPQVIHMEIGKYHLRRRHWRRTKL-- : UniRef90_UPI00045E5751
UniRef90_Q9UYI8 : -NKPLAKKLRLAKAMKQNRRVPVWVIVKTNRRHPKRRHWRRTKLKE : UniRef90_Q9UYI8
UniRef90_UPI0003AB612E : -HKIFRIKQFLTNKQKQILPTPQWIHMKTGMYNSKKRHWRRTKL-- : UniRef90_UPI0003AB612E
UniRef90_D1YUG3 : TKKSKGKKIRLAKYANQNRRVPAWVIMKTNRTHPKRRSWRRTSLPE : UniRef90_D1YUG3
UniRef90_D8LYU0 : SQKSFRTKKILAKKMRQNRPLPQWFRLRTDRYNAKRRHWKRTKL-- : UniRef90_D8LYU0
UniRef90_D5EC14 : SHNTKGQKMRLAKAHVQNQRVPTWAIIKSNRKHPKRRHWRRNSLK- : UniRef90_D5EC14
: 1---------11--------21--------31--------41---- :
OrigSeq : GKKSKATKKRLAKLDNQNSRVPAWVMLKTDRRNHKRRHWRRNDTDE : OrigSeq
Jnet : ----HHHHHHHHHHHH-------EEEE------------------- : Jnet
jhmm : ----HHHHHHHHHHH--------EHEH------------------- : jhmm
jpssm : ----HHHHHHHHHHHH------EEEEEE------------------ : jpssm
Lupas 14 : ---------------------------------------------- : Lupas 14
Lupas 21 : ---------------------------------------------- : Lupas 21
Lupas 28 : ---------------------------------------------- : Lupas 28
Jnet_25 : ----------B---------BB-BBBB-----------B----B-- : Jnet_25
Jnet_5 : ------------------------B-B------------------- : Jnet_5
Jnet_0 : ------------------------B--------------------- : Jnet_0
Jnet Rel : 9983799999999861478764043631577776566567778899 : Jnet Rel
Notes
Key:
Colour code for alignment:
Blue - Complete identity at a position
Shades of red - The more red a position is, the higher the level of
conservation of chemical properties of the amino acids
Jnet - Final secondary structure prediction for query
jalign - Jnet alignment prediction
jhmm - Jnet hmm profile prediction
jpssm - Jnet PSIBLAST pssm profile prediction
Lupas - Lupas Coil prediction (window size of 14, 21 and 28)
Note on coiled coil predictions - = less than 50% probability
c = between 50% and 90% probability
C = greater than 90% probability
Jnet_25 - Jnet prediction of burial, less than 25% solvent accesibility
Jnet_5 - Jnet prediction of burial, less than 5% exposure
Jnet_0 - Jnet prediction of burial, 0% exposure
Jnet Rel - Jnet reliability of prediction accuracy, ranges from 0 to 9, bigger is better.