SILENT_MODE BLOCK_FILE jp_ESKxxsS.concise.blc MAX_NSEQ 50 MAX_INPUT_LEN 50 OUTPUT_FILE jp_ESKxxsS.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 127 11 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 12 127 21 H SPACE SUB_CHARS 1 12 127 21 E SPACE SUB_CHARS 1 12 127 21 - SPACE STRAND 20 15 27 COLOUR_TEXT_REGION 20 15 27 15 51 STRAND 34 15 43 COLOUR_TEXT_REGION 34 15 43 15 51 STRAND 48 15 55 COLOUR_TEXT_REGION 48 15 55 15 51 STRAND 69 15 77 COLOUR_TEXT_REGION 69 15 77 15 51 STRAND 83 15 88 COLOUR_TEXT_REGION 83 15 88 15 51 STRAND 92 15 97 COLOUR_TEXT_REGION 92 15 97 15 51 STRAND 101 15 106 COLOUR_TEXT_REGION 101 15 106 15 51 HELIX 5 15 15 COLOUR_TEXT_REGION 5 15 15 15 50 HELIX 59 15 65 COLOUR_TEXT_REGION 59 15 65 15 50 HELIX 111 15 125 COLOUR_TEXT_REGION 111 15 125 15 50 STRAND 20 20 27 COLOUR_TEXT_REGION 20 20 27 20 51 STRAND 34 20 43 COLOUR_TEXT_REGION 34 20 43 20 51 STRAND 48 20 55 COLOUR_TEXT_REGION 48 20 55 20 51 STRAND 69 20 77 COLOUR_TEXT_REGION 69 20 77 20 51 STRAND 84 20 88 COLOUR_TEXT_REGION 84 20 88 20 51 STRAND 92 20 97 COLOUR_TEXT_REGION 92 20 97 20 51 STRAND 101 20 107 COLOUR_TEXT_REGION 101 20 107 20 51 HELIX 5 20 15 COLOUR_TEXT_REGION 5 20 15 20 50 HELIX 59 20 66 COLOUR_TEXT_REGION 59 20 66 20 50 HELIX 111 20 125 COLOUR_TEXT_REGION 111 20 125 20 50 STRAND 20 21 27 COLOUR_TEXT_REGION 20 21 27 21 51 STRAND 33 21 43 COLOUR_TEXT_REGION 33 21 43 21 51 STRAND 48 21 55 COLOUR_TEXT_REGION 48 21 55 21 51 STRAND 69 21 77 COLOUR_TEXT_REGION 69 21 77 21 51 STRAND 82 21 88 COLOUR_TEXT_REGION 82 21 88 21 51 STRAND 92 21 97 COLOUR_TEXT_REGION 92 21 97 21 51 STRAND 101 21 106 COLOUR_TEXT_REGION 101 21 106 21 51 HELIX 6 21 14 COLOUR_TEXT_REGION 6 21 14 21 50 HELIX 60 21 65 COLOUR_TEXT_REGION 60 21 65 21 50 HELIX 111 21 125 COLOUR_TEXT_REGION 111 21 125 21 50