SILENT_MODE BLOCK_FILE jp_fF8OqoC.concise.blc MAX_NSEQ 1106 MAX_INPUT_LEN 1108 OUTPUT_FILE jp_fF8OqoC.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 309 1095 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 1096 309 1105 H SPACE SUB_CHARS 1 1096 309 1105 E SPACE SUB_CHARS 1 1096 309 1105 - SPACE STRAND 3 1099 9 COLOUR_TEXT_REGION 3 1099 9 1099 51 STRAND 12 1099 19 COLOUR_TEXT_REGION 12 1099 19 1099 51 STRAND 128 1099 129 COLOUR_TEXT_REGION 128 1099 129 1099 51 STRAND 135 1099 136 COLOUR_TEXT_REGION 135 1099 136 1099 51 STRAND 143 1099 145 COLOUR_TEXT_REGION 143 1099 145 1099 51 STRAND 171 1099 174 COLOUR_TEXT_REGION 171 1099 174 1099 51 STRAND 179 1099 182 COLOUR_TEXT_REGION 179 1099 182 1099 51 STRAND 191 1099 196 COLOUR_TEXT_REGION 191 1099 196 1099 51 STRAND 204 1099 209 COLOUR_TEXT_REGION 204 1099 209 1099 51 STRAND 213 1099 217 COLOUR_TEXT_REGION 213 1099 217 1099 51 STRAND 222 1099 226 COLOUR_TEXT_REGION 222 1099 226 1099 51 STRAND 230 1099 235 COLOUR_TEXT_REGION 230 1099 235 1099 51 STRAND 247 1099 252 COLOUR_TEXT_REGION 247 1099 252 1099 51 STRAND 285 1099 292 COLOUR_TEXT_REGION 285 1099 292 1099 51 STRAND 296 1099 299 COLOUR_TEXT_REGION 296 1099 299 1099 51 HELIX 25 1099 43 COLOUR_TEXT_REGION 25 1099 43 1099 50 HELIX 50 1099 56 COLOUR_TEXT_REGION 50 1099 56 1099 50 HELIX 67 1099 82 COLOUR_TEXT_REGION 67 1099 82 1099 50 HELIX 92 1099 98 COLOUR_TEXT_REGION 92 1099 98 1099 50 HELIX 112 1099 120 COLOUR_TEXT_REGION 112 1099 120 1099 50 HELIX 151 1099 165 COLOUR_TEXT_REGION 151 1099 165 1099 50 HELIX 258 1099 268 COLOUR_TEXT_REGION 258 1099 268 1099 50 HELIX 271 1099 280 COLOUR_TEXT_REGION 271 1099 280 1099 50 HELIX 303 1099 307 COLOUR_TEXT_REGION 303 1099 307 1099 50 STRAND 3 1104 9 COLOUR_TEXT_REGION 3 1104 9 1104 51 STRAND 12 1104 19 COLOUR_TEXT_REGION 12 1104 19 1104 51 STRAND 63 1104 64 COLOUR_TEXT_REGION 63 1104 64 1104 51 STRAND 128 1104 129 COLOUR_TEXT_REGION 128 1104 129 1104 51 STRAND 134 1104 137 COLOUR_TEXT_REGION 134 1104 137 1104 51 STRAND 143 1104 145 COLOUR_TEXT_REGION 143 1104 145 1104 51 STRAND 172 1104 174 COLOUR_TEXT_REGION 172 1104 174 1104 51 STRAND 179 1104 182 COLOUR_TEXT_REGION 179 1104 182 1104 51 STRAND 191 1104 196 COLOUR_TEXT_REGION 191 1104 196 1104 51 STRAND 204 1104 209 COLOUR_TEXT_REGION 204 1104 209 1104 51 STRAND 213 1104 217 COLOUR_TEXT_REGION 213 1104 217 1104 51 STRAND 222 1104 226 COLOUR_TEXT_REGION 222 1104 226 1104 51 STRAND 230 1104 235 COLOUR_TEXT_REGION 230 1104 235 1104 51 STRAND 247 1104 252 COLOUR_TEXT_REGION 247 1104 252 1104 51 STRAND 285 1104 292 COLOUR_TEXT_REGION 285 1104 292 1104 51 STRAND 296 1104 299 COLOUR_TEXT_REGION 296 1104 299 1104 51 HELIX 25 1104 43 COLOUR_TEXT_REGION 25 1104 43 1104 50 HELIX 50 1104 56 COLOUR_TEXT_REGION 50 1104 56 1104 50 HELIX 67 1104 83 COLOUR_TEXT_REGION 67 1104 83 1104 50 HELIX 91 1104 98 COLOUR_TEXT_REGION 91 1104 98 1104 50 HELIX 112 1104 120 COLOUR_TEXT_REGION 112 1104 120 1104 50 HELIX 150 1104 164 COLOUR_TEXT_REGION 150 1104 164 1104 50 HELIX 258 1104 268 COLOUR_TEXT_REGION 258 1104 268 1104 50 HELIX 271 1104 280 COLOUR_TEXT_REGION 271 1104 280 1104 50 HELIX 303 1104 307 COLOUR_TEXT_REGION 303 1104 307 1104 50 STRAND 3 1105 9 COLOUR_TEXT_REGION 3 1105 9 1105 51 STRAND 13 1105 19 COLOUR_TEXT_REGION 13 1105 19 1105 51 STRAND 143 1105 145 COLOUR_TEXT_REGION 143 1105 145 1105 51 STRAND 171 1105 174 COLOUR_TEXT_REGION 171 1105 174 1105 51 STRAND 178 1105 182 COLOUR_TEXT_REGION 178 1105 182 1105 51 STRAND 191 1105 195 COLOUR_TEXT_REGION 191 1105 195 1105 51 STRAND 204 1105 208 COLOUR_TEXT_REGION 204 1105 208 1105 51 STRAND 213 1105 218 COLOUR_TEXT_REGION 213 1105 218 1105 51 STRAND 223 1105 226 COLOUR_TEXT_REGION 223 1105 226 1105 51 STRAND 230 1105 235 COLOUR_TEXT_REGION 230 1105 235 1105 51 STRAND 246 1105 252 COLOUR_TEXT_REGION 246 1105 252 1105 51 STRAND 286 1105 292 COLOUR_TEXT_REGION 286 1105 292 1105 51 STRAND 296 1105 299 COLOUR_TEXT_REGION 296 1105 299 1105 51 HELIX 25 1105 43 COLOUR_TEXT_REGION 25 1105 43 1105 50 HELIX 51 1105 56 COLOUR_TEXT_REGION 51 1105 56 1105 50 HELIX 67 1105 80 COLOUR_TEXT_REGION 67 1105 80 1105 50 HELIX 94 1105 98 COLOUR_TEXT_REGION 94 1105 98 1105 50 HELIX 112 1105 120 COLOUR_TEXT_REGION 112 1105 120 1105 50 HELIX 127 1105 129 COLOUR_TEXT_REGION 127 1105 129 1105 50 HELIX 151 1105 165 COLOUR_TEXT_REGION 151 1105 165 1105 50 HELIX 260 1105 268 COLOUR_TEXT_REGION 260 1105 268 1105 50 HELIX 271 1105 281 COLOUR_TEXT_REGION 271 1105 281 1105 50 HELIX 304 1105 306 COLOUR_TEXT_REGION 304 1105 306 1105 50