SILENT_MODE BLOCK_FILE jp_GKAspI3.concise.blc MAX_NSEQ 911 MAX_INPUT_LEN 913 OUTPUT_FILE jp_GKAspI3.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 363 900 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 901 363 910 H SPACE SUB_CHARS 1 901 363 910 E SPACE SUB_CHARS 1 901 363 910 - SPACE STRAND 9 904 9 COLOUR_TEXT_REGION 9 904 9 904 51 STRAND 13 904 21 COLOUR_TEXT_REGION 13 904 21 904 51 STRAND 52 904 57 COLOUR_TEXT_REGION 52 904 57 904 51 STRAND 96 904 100 COLOUR_TEXT_REGION 96 904 100 904 51 STRAND 177 904 179 COLOUR_TEXT_REGION 177 904 179 904 51 STRAND 230 904 234 COLOUR_TEXT_REGION 230 904 234 904 51 STRAND 264 904 268 COLOUR_TEXT_REGION 264 904 268 904 51 STRAND 296 904 298 COLOUR_TEXT_REGION 296 904 298 904 51 STRAND 318 904 321 COLOUR_TEXT_REGION 318 904 321 904 51 HELIX 37 904 47 COLOUR_TEXT_REGION 37 904 47 904 50 HELIX 79 904 91 COLOUR_TEXT_REGION 79 904 91 904 50 HELIX 152 904 172 COLOUR_TEXT_REGION 152 904 172 904 50 HELIX 206 904 223 COLOUR_TEXT_REGION 206 904 223 904 50 HELIX 248 904 259 COLOUR_TEXT_REGION 248 904 259 904 50 HELIX 283 904 290 COLOUR_TEXT_REGION 283 904 290 904 50 HELIX 304 904 312 COLOUR_TEXT_REGION 304 904 312 904 50 HELIX 323 904 327 COLOUR_TEXT_REGION 323 904 327 904 50 HELIX 330 904 337 COLOUR_TEXT_REGION 330 904 337 904 50 STRAND 9 909 10 COLOUR_TEXT_REGION 9 909 10 909 51 STRAND 13 909 15 COLOUR_TEXT_REGION 13 909 15 909 51 STRAND 18 909 21 COLOUR_TEXT_REGION 18 909 21 909 51 STRAND 52 909 57 COLOUR_TEXT_REGION 52 909 57 909 51 STRAND 95 909 101 COLOUR_TEXT_REGION 95 909 101 909 51 STRAND 148 909 149 COLOUR_TEXT_REGION 148 909 149 909 51 STRAND 176 909 180 COLOUR_TEXT_REGION 176 909 180 909 51 STRAND 230 909 234 COLOUR_TEXT_REGION 230 909 234 909 51 STRAND 264 909 268 COLOUR_TEXT_REGION 264 909 268 909 51 STRAND 296 909 299 COLOUR_TEXT_REGION 296 909 299 909 51 STRAND 318 909 321 COLOUR_TEXT_REGION 318 909 321 909 51 HELIX 37 909 47 COLOUR_TEXT_REGION 37 909 47 909 50 HELIX 76 909 91 COLOUR_TEXT_REGION 76 909 91 909 50 HELIX 152 909 172 COLOUR_TEXT_REGION 152 909 172 909 50 HELIX 187 909 189 COLOUR_TEXT_REGION 187 909 189 909 50 HELIX 206 909 223 COLOUR_TEXT_REGION 206 909 223 909 50 HELIX 248 909 258 COLOUR_TEXT_REGION 248 909 258 909 50 HELIX 283 909 290 COLOUR_TEXT_REGION 283 909 290 909 50 HELIX 304 909 312 COLOUR_TEXT_REGION 304 909 312 909 50 HELIX 323 909 326 COLOUR_TEXT_REGION 323 909 326 909 50 HELIX 331 909 337 COLOUR_TEXT_REGION 331 909 337 909 50 STRAND 7 910 9 COLOUR_TEXT_REGION 7 910 9 910 51 STRAND 13 910 22 COLOUR_TEXT_REGION 13 910 22 910 51 STRAND 53 910 57 COLOUR_TEXT_REGION 53 910 57 910 51 STRAND 97 910 98 COLOUR_TEXT_REGION 97 910 98 910 51 STRAND 178 910 179 COLOUR_TEXT_REGION 178 910 179 910 51 STRAND 230 910 235 COLOUR_TEXT_REGION 230 910 235 910 51 STRAND 265 910 269 COLOUR_TEXT_REGION 265 910 269 910 51 STRAND 296 910 297 COLOUR_TEXT_REGION 296 910 297 910 51 STRAND 317 910 320 COLOUR_TEXT_REGION 317 910 320 910 51 HELIX 83 910 91 COLOUR_TEXT_REGION 83 910 91 910 50 HELIX 99 910 104 COLOUR_TEXT_REGION 99 910 104 910 50 HELIX 152 910 173 COLOUR_TEXT_REGION 152 910 173 910 50 HELIX 206 910 223 COLOUR_TEXT_REGION 206 910 223 910 50 HELIX 248 910 259 COLOUR_TEXT_REGION 248 910 259 910 50 HELIX 283 910 291 COLOUR_TEXT_REGION 283 910 291 910 50 HELIX 304 910 311 COLOUR_TEXT_REGION 304 910 311 910 50 HELIX 321 910 337 COLOUR_TEXT_REGION 321 910 337 910 50