QUERY : KELTLAQTESLREVCETNMACDEMADAQGIVAAYQAFYGPIPF : QUERY
UniRef90_W5KVY8 : --LTPVQLESLREVCEVNMACDEMADTNGIVAAYTTYYGPVPF : UniRef90_W5KVY8
UniRef90_F1QK63 : -DLTPFQLESLREVCETNVACEHMMDTSGIITAYKTYYGPIPF : UniRef90_F1QK63
UniRef90_B7ZK43 : -ELSLTQLESLREVCETNLACEEMMDTTGIIAAYNAFYGPIP- : UniRef90_B7ZK43
UniRef90_Q1EG28 : KELSLSQLESLREVCELNLACEDMMDTSGIIAAYTTYYGPIPF : UniRef90_Q1EG28
UniRef90_W5N2M6 : ---SLQQLESLREVCEVNLACEHMAETAGIVAAYTQYYGPIPY : UniRef90_W5N2M6
UniRef90_H1AAU8 : -DPTVAQLESLKEVCEANLACEHMMDVSGIIAAYTAYYGPIPY : UniRef90_H1AAU8
UniRef90_I6R219 : -ELTLTQLESLMEVCEVDVACESMMDTAGIIAAYTAHYGPIPF : UniRef90_I6R219
UniRef90_Q5DT87 : -DLYLTQLESLREACELNYWCENMMDTAGIIAAYTEFYGPIPY : UniRef90_Q5DT87
UniRef90_UPI000333EFD6 : --PAPDPLEPQREVCELNPDCDELADHIGFQDAYQRFYGRV-- : UniRef90_UPI000333EFD6
UniRef90_I6QWI9 : --LSPLQTESLREVCELHDGCDEMAETEGIVAAYTAYYGPVPF : UniRef90_I6QWI9
UniRef90_E6Y296 : --LSPQKLESLSEVCELNTACNDLSDTVGIVAAYQKHFGPIP- : UniRef90_E6Y296
UniRef90_UPI0004421C01 : -NVAVDPLEAHREVCELSPACDELADHIGFQEAYRRFYGPI-- : UniRef90_UPI0004421C01
UniRef90_P83238 : -DLTPFQLESLREVCEVNLACEHMADTXGIVAAYTAYYG---- : UniRef90_P83238
UniRef90_P02822 : ----PNPLEAQREVCELSPDCDELADQIGFQEAYRRFYGPV-- : UniRef90_P02822
UniRef90_M7B738 : -----DPLEGKREICELNPDCDELADHIGFHKAYRRYYGAV-- : UniRef90_M7B738
UniRef90_UPI00035959DA : ----PDPLEPKREVCELNPDCDELAEQIGLQNAYSRYYGTTP- : UniRef90_UPI00035959DA
UniRef90_G3THN5 : ----PDPLELKKEVCELNPDCDELADHIGFHEAYRRFYGTV-- : UniRef90_G3THN5
UniRef90_UPI0002C55A0D : ----PDPLEPKREVCELSPNCDELADHIGFQDAYQRFY----- : UniRef90_UPI0002C55A0D
UniRef90_UPI00032B0023 : -------LEPTREVCELNPDCDELADQVGLQDAYQRFYGMV-- : UniRef90_UPI00032B0023
UniRef90_P86547 : --PSPDPLEPTREQCELNPACDELSDQYGLKTAYKRIYG---- : UniRef90_P86547
UniRef90_P84351 : -----------REVCELNPDCDELADHIGFQEAYR-------- : UniRef90_P84351
UniRef90_Q49UC0 : --------------------CEHMADTSGIIAAYKTYYGPIPF : UniRef90_Q49UC0
UniRef90_P86312 : -----DPLEPKREV-------DELADQMGFQEAYRRFYGTT-- : UniRef90_P86312
UniRef90_M7B416 : -ELYKSPMELRKEQCENYAPCDYLSEHVGFHAAYQRYFG---- : UniRef90_M7B416
UniRef90_U3K9X8 : ------PLEQQHERCENYPPCDYLADQVGFALAYSRFFG---- : UniRef90_U3K9X8
UniRef90_UPI0001DE75ED : ------PLELKKEQCENYSPCDQLSEWVGFYQAYQTYFGPV-- : UniRef90_UPI0001DE75ED
UniRef90_UPI0003835508 : ------PMEQMHERCENYPPCDYLADQIGFSMAYNRFFG---- : UniRef90_UPI0003835508
UniRef90_UPI0003C1A611 : ------PLEQKREVCEEYKPCERFARSFGIEIAYRRFFG---- : UniRef90_UPI0003C1A611
UniRef90_UPI0003C4BA0D : ------PMELRKEQCENYAPCDYLSEQMGFYVAYQRFFG---- : UniRef90_UPI0003C4BA0D
: 1---------11--------21--------31--------41- :
OrigSeq : KELTLAQTESLREVCETNMACDEMADAQGIVAAYQAFYGPIPF : OrigSeq
Jnet : -------HHHHHHHH-----HHHHHHHHHHHHHHHHH------ : Jnet
jhmm : ------HHHHH-HHH-----HHHHHHHHHHHHHHHH------- : jhmm
jpssm : ----------HHHHH-----HHHHHHHHHHHHHHHHH------ : jpssm
Lupas 14 : ------------------------------------------- : Lupas 14
Lupas 21 : ------------------------------------------- : Lupas 21
Lupas 28 : ------------------------------------------- : Lupas 28
Jnet_25 : -------B-----BB-B---B--BB--BBB--BB--BBB-B-- : Jnet_25
Jnet_5 : --------------------B--------B--BB--------- : Jnet_5
Jnet_0 : --------------------------------B---------- : Jnet_0
Jnet Rel : 9998871022336532672228999998589999982168999 : Jnet Rel
Notes
Key:
Colour code for alignment:
Blue - Complete identity at a position
Shades of red - The more red a position is, the higher the level of
conservation of chemical properties of the amino acids
Jnet - Final secondary structure prediction for query
jalign - Jnet alignment prediction
jhmm - Jnet hmm profile prediction
jpssm - Jnet PSIBLAST pssm profile prediction
Lupas - Lupas Coil prediction (window size of 14, 21 and 28)
Note on coiled coil predictions - = less than 50% probability
c = between 50% and 90% probability
C = greater than 90% probability
Jnet_25 - Jnet prediction of burial, less than 25% solvent accesibility
Jnet_5 - Jnet prediction of burial, less than 5% exposure
Jnet_0 - Jnet prediction of burial, 0% exposure
Jnet Rel - Jnet reliability of prediction accuracy, ranges from 0 to 9, bigger is better.