SILENT_MODE BLOCK_FILE jp_mSmB9Xd.concise.blc MAX_NSEQ 75 MAX_INPUT_LEN 77 OUTPUT_FILE jp_mSmB9Xd.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 120 64 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 65 120 74 H SPACE SUB_CHARS 1 65 120 74 E SPACE SUB_CHARS 1 65 120 74 - SPACE STRAND 3 68 6 COLOUR_TEXT_REGION 3 68 6 68 51 STRAND 16 68 19 COLOUR_TEXT_REGION 16 68 19 68 51 STRAND 25 68 29 COLOUR_TEXT_REGION 25 68 29 68 51 STRAND 34 68 41 COLOUR_TEXT_REGION 34 68 41 68 51 STRAND 45 68 53 COLOUR_TEXT_REGION 45 68 53 68 51 STRAND 60 68 66 COLOUR_TEXT_REGION 60 68 66 68 51 STRAND 70 68 76 COLOUR_TEXT_REGION 70 68 76 68 51 STRAND 83 68 86 COLOUR_TEXT_REGION 83 68 86 68 51 STRAND 97 68 104 COLOUR_TEXT_REGION 97 68 104 68 51 STRAND 111 68 119 COLOUR_TEXT_REGION 111 68 119 68 51 STRAND 3 73 7 COLOUR_TEXT_REGION 3 73 7 73 51 STRAND 16 73 19 COLOUR_TEXT_REGION 16 73 19 73 51 STRAND 26 73 29 COLOUR_TEXT_REGION 26 73 29 73 51 STRAND 34 73 40 COLOUR_TEXT_REGION 34 73 40 73 51 STRAND 45 73 53 COLOUR_TEXT_REGION 45 73 53 73 51 STRAND 60 73 66 COLOUR_TEXT_REGION 60 73 66 73 51 STRAND 70 73 75 COLOUR_TEXT_REGION 70 73 75 73 51 STRAND 83 73 87 COLOUR_TEXT_REGION 83 73 87 73 51 STRAND 97 73 104 COLOUR_TEXT_REGION 97 73 104 73 51 STRAND 111 73 119 COLOUR_TEXT_REGION 111 73 119 73 51 STRAND 3 74 5 COLOUR_TEXT_REGION 3 74 5 74 51 STRAND 17 74 19 COLOUR_TEXT_REGION 17 74 19 74 51 STRAND 25 74 30 COLOUR_TEXT_REGION 25 74 30 74 51 STRAND 34 74 41 COLOUR_TEXT_REGION 34 74 41 74 51 STRAND 46 74 53 COLOUR_TEXT_REGION 46 74 53 74 51 STRAND 61 74 66 COLOUR_TEXT_REGION 61 74 66 74 51 STRAND 70 74 76 COLOUR_TEXT_REGION 70 74 76 74 51 STRAND 82 74 84 COLOUR_TEXT_REGION 82 74 84 74 51 STRAND 97 74 104 COLOUR_TEXT_REGION 97 74 104 74 51 STRAND 111 74 119 COLOUR_TEXT_REGION 111 74 119 74 51