QUERY : ITKVEAENMKIGGTYAGKISAPFDGVALYANADYVSYSQYFANSTHNISVRGASSNAGTAKVDLVIGGVTVGSFNFTGKTPTVQTLSNITHATGDQEIKLALTSDDGTWDAYVDFIEFSL : QUERY
UniRef90_UPI0003754DE5 : VTKIESENMTKAGQYTGNISSPFNGVALYGNNDSVKYTQYFGSGTHNFSLRGASNNSNMARVDLKIGGVTKGTFYFGGSNPAVYTLSNISHGTGNQEIELVVTADDGTWDAYLDYLEIN- : UniRef90_UPI0003754DE5
UniRef90_P83513 : --KIQCETMTKSGQYTGNISSPFNGVALYANNDAVKYTQYFASGTHDFTLRGCSNNNKMARVDLKIGGQNKGTFYYGDSYPAEYTIKNVSHGTGNQTIELVVTADDGQWDAYLDYFNNSV : UniRef90_P83513
UniRef90_W4BEB2 : -TRYEAENMTLGGQYAGVISSPFNGVALYGNNDYAAYNQYFAFPTHQFSVRGASNNNNTARVDLVIGGVTAGSFYFTGTEPTVQTLTGITHATGNQEIKLVVTTDNGTWDAYIDYLEYSL : UniRef90_W4BEB2
UniRef90_B8E1P4 : VTRVECENMSLSGPYASRISSPFNGVALYANNDRAYYTQYFANSVHTFRLRGCSSNNNTAAVDLRIGGQKVGTFYFTGTTPTVQTLSNISHATGNQTVELILTSDNGTWDVYLDYLEI-- : UniRef90_B8E1P4
UniRef90_K0J5P9 : VTRIEAETMSINGPYAGPISSPFDGVALYANNDSVKFTHYFDSNNNSFSLRGASNNNNMARADLRIGGQTVGTFYYGDHYPAVYTINNVYHGTGFQEVELIVTADDGTWDAFIDYLEI-- : UniRef90_K0J5P9
UniRef90_UPI0003B57526 : -TSMQCEQMTKSGQYTGNINSPFSGVALYANNDSVSFTQNFTSGTHDFTLRGASNNDNMARVDLKIGGEYKGTFYYGGSYPAEYTIENVNHKTGNQKVELIVTADDGNWDAFIDSLKWS- : UniRef90_UPI0003B57526
UniRef90_UPI0003B57526 : -TSKQCEDMTKSGQYTGSISSPFNGVALYANNDSVSFTQYFAYGTHDFTLRGASNNNNMARVDLKIGGEYKGTFYYGDANTAEYTIKNVNHGTGNQKIELVVTADDGNWDAYLDSLRW-- : UniRef90_UPI0003B57526
UniRef90_R7C559 : --TVQCEDMKLGGSYAGKISSPFNGVALYGNNDSCSYTQYFGYGTHDFTLRGCSNNSKMARVDLYVGGQKKGTFYYGGSYPAEYTIKNVTHGLGNQEVKLVVTSDDGTWDGYIDYLTI-- : UniRef90_R7C559
UniRef90_R6YEV7 : --RKECESMTLGGSYAGRINSPFSGVALYANGDNCKFTQYFAYGTHSFSLRGCSNNDKMAKVDLYIGGTKKGTFYYGGSYPAVYTINNVSHGTGNQEIKLVCSEDNGTWDAYVDYLTW-- : UniRef90_R6YEV7
UniRef90_UPI00047E2FFA : --TVQCESMTKSGQYADTIGSPFNGMALYANNDKLSFNQNFASDTSDFTLRGCSNNNNMARVDLRIGGQNKGTFYYGGPYPAEYTIKNVKHGTGNQTVELVVTADNNQWDAYVDYLKF-- : UniRef90_UPI00047E2FFA
UniRef90_F8FJN9 : -TKVEAETMTLGGTYAGKVSSPFSGVVLYANQDSAAYTQYFANSTHSISVRGASSSSATARVDLLIGGTAVGSFYFTGTAPTVQTLSGISHATGNQEVKLVLTTDNGTWDAYVDYIEF-- : UniRef90_F8FJN9
UniRef90_W8TI16 : -TKVEVESMTKGGQYTGNISLPFNGVALYSNNDLVKYTQYFASGTHHFSLRGASSNSNMARVDLKIGGQAKGTFYFGGSIPAVYTLTNVSHGAGNQEIELVLTA-----ETYIDYLEIN- : UniRef90_W8TI16
UniRef90_W4D5P5 : VSKVEAEDMTLSGTYAGKITSPFSGVALYGNDDAAAFNQYYAYGTHNFSVRGASNNSSTARVDLLIGGVNVGSFNFSGTTPSVQTLTNVAHATGNQEVNLVVTTDNGSWDAYVDYIEWS- : UniRef90_W4D5P5
UniRef90_X0SL22 : -TRVEAESMTKGGPYTSNITSPFNGVALYANGDNVSFNHSFTKANSSFSLRGASNNSNMARVDLRIGGQNRGTFYFGDQYPAVYTINNINHGIGNQLVELIVTADDGTWDAYLDYLEI-- : UniRef90_X0SL22
UniRef90_I6ZTY5 : --RIEAESMTKSGQYTGNIYSPFNGVALYANNDSVKFTHNFTKSTNNFSLRGASNNSQMARVDLKVGGVTKGTFYYGGSYPAVYTINNVNTGTGNQQVELILTADNGQWDAFLDYLEIN- : UniRef90_I6ZTY5
UniRef90_UPI0003B54113 : --TVQCEDMTKSGQYTGTISSPFNGVALYANNDTVSFDQYFAYGTHSFTLRGCSNNSNMARVDLKIGGEKVGTFYYGDEYPAEYTIENVNHKTGAVTVELTVSADDGTWDAYLDYLTW-- : UniRef90_UPI0003B54113
UniRef90_V9NCQ7 : -TVVQAQDMNVDGPWANYISSPFDGVVLHGNDDRITYTQYFANDTHSFSLRGASNNNNLAQVDLRIGGQYVGTFYYGDHHPAVYTIDNVQHGTGHQEVELILTNNDGNWDAYIDYLEI-- : UniRef90_V9NCQ7
UniRef90_A9KRI5 : -TRYECENMTLGGQYAGKISSPFTGVALYANNDYCQTGNITWNNTQTISIRGSSSNSNTATVVVKMNGNEMGKVNFTGTTPTVQSFT-CTPQSGSYPVQLIVTNDNGTWDVYVDYLEIS- : UniRef90_A9KRI5
UniRef90_B5YCB5 : --RIECENMSLSGPYVSRITSPFNGIALYANGDSARATVNFASRNYNFRLRGCGNNNNLARVDLRIDGRTVGTFYYQGTYPWEAPIDNVYVSAGSHTVEIVVTADNGTWDVYADYLLI-- : UniRef90_B5YCB5
UniRef90_G7VQ68 : -TKKECESMTKGGQYTSNISSSFSGVALYANNDSVKYTQYFESGTHNFSLRGASNNSNMARVDLKIGGQTKGTFYFGGSNPAVYTLNNVSHGTGIKRLSL-------------------- : UniRef90_G7VQ68
UniRef90_UPI000472131D : ISKYEAESMTKAGSYTSNISSPFTGVALYANNDLVKNSTTFATGKYEMRVRGASSNSSAAGVSVYVGGSKKASLSFTGTTPAIQSLFDVTSGTSSQEVQLKLETDNGSNDTLIDYYELYF : UniRef90_UPI000472131D
UniRef90_R6ANF3 : -QTLEAETMAPGGQYAGKCSSPFQGMALCANGDNATGVVSLTNGSYNIKVTGASSNGTAAGVALYVGGKKMADMSFSGTAPSVQQVQTKLYLDASSDVKLNLENDNGSNDTYIDKIEFEF : UniRef90_R6ANF3
UniRef90_R9PIS6 : LQKFEMENGSLLPGYSGLIDSPFNGVAAYANNDGLETSAQISNGEFRLDIRGASSANNAAGISVYLGGQKIGATEFSGTSASVNSINKLDTQPSSANLQFRLETDNGSNDTFLDWYEL-- : UniRef90_R9PIS6
UniRef90_R9PIS6 : LEQVELETGVITPSYRQPITSPYAGVILYGNGEAVTVSSNLAAGDYSLVINGSSSNNTAAGISVYADNVKVGTASFIGTSRTEQTIFSLTSAASS--LKFVLETDVGQNDTLLDWYQLY- : UniRef90_R9PIS6
UniRef90_R7C784 : ----------LAGYLSGK---EYSGVALYANNDYCSTSYEFTNKKYRMVVKGASSNSSTASVSVYIGGKKVGKVSFTGTTLSEQSFEKMTDVTGKQEIKFLLETDNGSNDTYVNSYELYY : UniRef90_R7C784
UniRef90_M5H842 : ----ELEGGTLLPGYSSVIDTPFNGVAAFANNDGVEVNTQVSGGKFRLDIRGASTDNSAAGISVYLGDKKVGATSFSGSSASVSSIDKLSSQPSNTKLKFVLESDNGGNDTFLDFYEL-- : UniRef90_M5H842
UniRef90_K9XTH9 : ------------------------------NGEWLEYTTNVTEGTYDIKVRVASAIEDPGSLQVKLGDELLGTVDITGTGGWQNTIEDVQ-LAGSQEQSLRLEVKDGGL-FNINWLEFE- : UniRef90_K9XTH9
UniRef90_K9XTH9 : ------------------------------NGEWLEYTTNVTEGTYDIKVRVASAIEDPGSLQVKLGNELLGTVDVTGTGGWQNKIEGIQIPAG-QEQLLRLEVKDGGL-FNINWLEFE- : UniRef90_K9XTH9
UniRef90_D5EIK7 : -----------------------------GNGEWLEYTVDAATGNYDIELRVASGSTTPGDVQVSLDGEILGTFDLSSTGGWQTTLNNVAITGGNDKV-LRLTA-VGAN-FNINWIQFN- : UniRef90_D5EIK7
UniRef90_E6TY93 : -----------------------------GNGDWVRFNNNFNEGTSSVNIRAASDNDG-GTVEFRIGGTLIGTVDVSNTGGWQQTFSGDVDVDGTHDLFLVFTGDSSQDLMNVNWIEF-- : UniRef90_E6TY93
UniRef90_E6TY93 : -----------------------------ANGDWVRYNNNFNEGASSVNVRAAS-DADGGTVEFRLGGQLIGTVDVSNTGGWQQTFSGDVDVEGTHDLFLVFTS-NSSNDMNVNWFEFE- : UniRef90_E6TY93
UniRef90_R5L8H0 : -----------------------------SDGKWVQYNINFDRMTSRIYLRYSGNENSAGKIDVYVDNSTMGTVSSTGSWSTYTDISGVSIPAGNHKIYLKFTTDTGKNYVNLDYFQFEY : UniRef90_R5L8H0
UniRef90_S8BUF6 : --RQEAETIAFSSGLKTEVCSEGGNVAYIDNGDYIKVGVAFGTGAKSLSVRVASANSG-GQIEVRLGGTLVGTCSVAGTGGW-QTWTTVTGATGTQDLFFRFTGSSGTTLFNFNWWQFS- : UniRef90_S8BUF6
UniRef90_R9PRK9 : -------------------------------GEWLQYTINITQGNYDVDLRLAAAGTSDKSVSLNIDGNALGNVNFKATDGWQQTLKNVY-ISGESNQQLRVHMETGAL--NLNWIEF-- : UniRef90_R9PRK9
UniRef90_UPI0001E2C70E : ---VQTENCSEGGKNIGYIDT----------GDYIVFNVDFGNGASAFNARVASANNG-GSIEIRLDGTLVGTCFISGTGGWQNWTTDVNGLTGKHKLYLVLKG-NGSGLFNVNWFKFS- : UniRef90_UPI0001E2C70E
UniRef90_UPI000382D516 : -------------------------------GDWMEYKVNIADGTYTVKYRVAVNTGNTGEVQFTINGVNKKTTSFPATGGWQNTVSDVTLPAGTHTVRLYVS--KGGWNF--NWFEL-- : UniRef90_UPI000382D516
UniRef90_UPI000363C8E2 : -------------------------------GEWTEYTVDTITGTYEARLRVASNRGN-GRIRLLLDGEVVGTVDIPKTGGWQNTIPELSFDAGDGRV-LRVEALEGGY--NLNWIEF-- : UniRef90_UPI000363C8E2
UniRef90_D5EL47 : --------------WDGNAQDPARLVGAIANGEYLNYDVNVTPGTFDIVARVAPDNSTTRRIDVTIDGISLGSFNLSSTGGWRNTIPGVTLGVG-------------------------- : UniRef90_D5EL47
UniRef90_G0GAT5 : -------------------------------GEWLEYTVDVQEGYYNIEARVASNGAGAIG-DLRIDGVELGVFSVEATGGWQYTLYNVYLSGGSNKI-LRLEAVNGG-DFNINYLQF-- : UniRef90_G0GAT5
UniRef90_H2JDC8 : ------------------------------NGDYAVYNVNFGEGAQSFKARVSSATSG-GNIEIRLDGTLVGTCPVIGTGAWQNVICNVSGVTGKHDLYLKFTGDSGYL-FNINWFKFS- : UniRef90_H2JDC8
UniRef90_V9G6Q4 : ---VQLENASEGGQ----------NVAFIDNGDYIVFNNDFGSGAASIDVRVASNTSG-GNIEVRLGGTLIGTVAVPGTGGW-QTWQTVQSVTGVHTVYLKFTGGAGNL-FNLLWFKFN- : UniRef90_V9G6Q4
UniRef90_I1S8L1 : ---VETEACSEGGLAVSFIN----------NGDYIKVGVAFGNGAQSFSARVASANSKGGKIELRLGGKLVGTCTVPSTGGW-QTWKTVSGATGTSDLFLRFTGEGSDYLFNVNWWQF-- : UniRef90_I1S8L1
UniRef90_E5C999 : --------------------------------DEVSVT---DTGNYSLRIRYC-AAATVNTVDLYVNGVKVTTLEFTGVGNWETTSAGVSLNAGKNKVELIANGSSASCDLYLDNIVIE- : UniRef90_E5C999
UniRef90_B4WQG9 : ---------------TGDVEGDFN-IGIIAAGEYLTYDVNIATGTYEITLRLASGRSKDRDVDVSIGGQTFTTVPTTGSWGTYQTITDVDLAAGLQEIK--------------------- : UniRef90_B4WQG9
UniRef90_Q84IQ2 : IGKYEAESAELSGGSTVNQNHWFSGTALTAPGAQVKYTVNAAAGSYQIALRYANGTGAAKTLSTYVNGTKLGQTAFASPGGWQDSVQTVALAAGTNTIAFKYDADSGSGSVNLDRLLLS- : UniRef90_Q84IQ2
UniRef90_E3Q3S4 : ---VETETCSEGGMAVSWIN----------NNDYIKVGVAFGSGARTFSARVASANSG-GRIELRLGGALVGTCTVAGTGGWQNTVTPVSGATGTQDLYFRFTGGGGEL-FNFNWWQFS- : UniRef90_E3Q3S4
UniRef90_Q0UHG2 : --RIEAEQMTLSG-YKPYAVSPFETASGYSTTGTACANVTFASGVYDVAVNYFDLIGGKAKYWLEVGNKTVGSVYLDGHSATRITFSNVTVQQGD-EVRIIGQAD-GIEPAPLDYISF-- : UniRef90_Q0UHG2
UniRef90_R4LRA0 : -------------------------VSYLAAGDWLRYDNIGTTGALTVSARVASATGGTGAVELRTGGPLLASFAIAGTGGWQRTATVTSHPTGKQTVFAVMQNTTGGDFVNINWFSF-- : UniRef90_R4LRA0
UniRef90_F4C4M1 : -----------GGGYTGYINT----------GEWLAYTSNTVAGTYDINLRVASGDAATGKITVKLDNIPLGTVDITSTGGWEFTLSDVTVPSGSNKI-LRLEFEGIGY--NVNWVEF-- : UniRef90_F4C4M1
UniRef90_B4VQP2 : -------------------------------GEWLTYDVNIPEGTYDIVARVASAQSGTRSLKVSVGGESE-TLSFGGTGGWQNTAQGVNLSAGSQQLRL----DMLSNSFNVNYIDI-- : UniRef90_B4VQP2
UniRef90_B3PBJ2 : ---IEATSDTGGGYNVGWIEA----------NEWLAYNNLTSSGSYTVRMRVASPNGATASVDLNAGGIVLGDFPIPATGGWQNTVTNVNINAGTYN--LGVFARTNGWNF--NWIEI-- : UniRef90_B3PBJ2
UniRef90_S9QLE2 : --------------------------------EWVEYTVNVASGTYTVSARVATQTANGSSLRILFDGKKVGTLAVPNTGEW-QTYTTVSTQAGKHIIQLRF-----GDAFNLDYLTF-- : UniRef90_S9QLE2
UniRef90_F1T8Q4 : -TKIEAESFSQSGLQTEDCNEGGQNVGFIENNDYAVYSNIFGEGAKSFQARV-SSATNGGNIEIRIDGTLVGTCPIKGTGDWQTWADNVSGASGKHDLYLKFTGDSGYL-FNFNWFKFS- : UniRef90_F1T8Q4
UniRef90_G2GBT3 : ---IQAESFDAQGGVATESTSDSGGIAALANGDWAQYGVDFGSSTATFVARVASGAGSAVSVEVRLDSRSVGSFALGNTGGWQRTVPNISGVTGTHDVYLTFTSGQPSDFVNVNWFNF-- : UniRef90_G2GBT3
UniRef90_W2UH88 : -------------------------------GEWLEYEVTLSPGLYKVTARVASQAS-TGSFNLLLDGETIGSLSVSSTGGWQKTVGSIEVGPGARTLRLNVT----GSDFNINWIEF-- : UniRef90_W2UH88
UniRef90_E6UT93 : ---IENESCSEGGLNIGYIE----------NGDYVAYSNIFGNGAKEFQARVASATSG-GKIEIRLDGPLIGTCSVSGTGGWQQWVDEVSGVSGTHDLYLKFTGGSGYL-FNINWWKF-- : UniRef90_E6UT93
UniRef90_B1BZG6 : ------------------------------NDAWLRYNGVEFNGKTEMTVRYSHNPGTAGRIDVYMDGNPIGTINLPTTNGWANVIREVFDQTGSHDVYLKLHTDGSGWVANFDWFEF-- : UniRef90_B1BZG6
UniRef90_R9PLF4 : --KVKAENFS---QQQGVQTEPTNNVGYIENGDWVEYAIDVAAGEYTFSARVAS-DTNGGRFVVLANNAEKATVKVKGTGGWQNTLENLNLEAGAQTLRFNFKGSSGYL-FNINWFELS- : UniRef90_R9PLF4
UniRef90_UPI00046F399D : -SRIEAEDFNDMSGIQTEISSE-SGVGWIHNGDWTRYNDINLTGAQSIEVRVAC-NFTGGTIEVRIGGTLLGSVNTGGNQSWVTHTTNINNASGIHDVYLVFTGGSGYL-YNINWLEFS- : UniRef90_UPI00046F399D
UniRef90_W8YWL9 : ---IQLEASSEGGQ----------NVAFIDNGDYIAFNVDFGSGASSLDVRVASNNSGEARLD-SVSGTLIGTCAVPGTGGWQNWQTKVSGASGVHTLYLKFTGGAGNL-FNILWFKFN- : UniRef90_W8YWL9
: 1---------11--------21--------31--------41--------51--------61--------71--------81--------91--------101-------111------- :
OrigSeq : ITKVEAENMKIGGTYAGKISAPFDGVALYANADYVSYSQYFANSTHNISVRGASSNAGTAKVDLVIGGVTVGSFNFTGKTPTVQTLSNITHATGDQEIKLALTSDDGTWDAYVDFIEFSL : OrigSeq
Jnet : --EEEE---------EEEE-----EEEEE----EEEEEEEE---EEEEEEEEE------EEEEEEE---EEEEEEE------EEEE----------EEEEEEEE------EEEEEEEEE- : Jnet
jhmm : --EEEEE--------EEEE------EEEE----EEEEEEE----EEEEEEEEE------EEEEEEE---EEEEEE-------EEEEE---------EEEEEEEE------EEEEEEEEE- : jhmm
jpssm : --EEE-----------EEE-----EEEEEE---EEEEEEEE----EEEEEEEE-------EEEEEE---EEEEEEE-----EEE------------EEEEEEEE------EEEEEEEEE- : jpssm
Lupas 14 : ------------------------------------------------------------------------------------------------------------------------ : Lupas 14
Lupas 21 : ------------------------------------------------------------------------------------------------------------------------ : Lupas 21
Lupas 28 : ------------------------------------------------------------------------------------------------------------------------ : Lupas 28
Jnet_25 : ---B-B--B-----B---B-B-BBBBBBBBB---B-B-B-BB---B-BBBBBBB-----B-BBB-B-B--BB-B-B-B---BB-BB--B----B---BBBBB-B--B-BBBBBBBB-B-- : Jnet_25
Jnet_5 : -----B------------B-----BBBBBB----B------------B-B-BB--------B-B-B-----B-B-----------B-----------B-B-B--------BBB--B---- : Jnet_5
Jnet_0 : --------------------------BB---------------------B-BB--------B-B-----------------------------------B-------------------- : Jnet_0
Jnet Rel : 832542177777753104147884289971687068999805872689988715788871589985571689998147874154311776677775168888863788735752368837 : Jnet Rel
Notes
Key:
Colour code for alignment:
Blue - Complete identity at a position
Shades of red - The more red a position is, the higher the level of
conservation of chemical properties of the amino acids
Jnet - Final secondary structure prediction for query
jalign - Jnet alignment prediction
jhmm - Jnet hmm profile prediction
jpssm - Jnet PSIBLAST pssm profile prediction
Lupas - Lupas Coil prediction (window size of 14, 21 and 28)
Note on coiled coil predictions - = less than 50% probability
c = between 50% and 90% probability
C = greater than 90% probability
Jnet_25 - Jnet prediction of burial, less than 25% solvent accesibility
Jnet_5 - Jnet prediction of burial, less than 5% exposure
Jnet_0 - Jnet prediction of burial, 0% exposure
Jnet Rel - Jnet reliability of prediction accuracy, ranges from 0 to 9, bigger is better.