SILENT_MODE BLOCK_FILE jp__dqmlOH.concise.blc MAX_NSEQ 884 MAX_INPUT_LEN 886 OUTPUT_FILE jp__dqmlOH.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 153 873 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 874 153 883 H SPACE SUB_CHARS 1 874 153 883 E SPACE SUB_CHARS 1 874 153 883 - SPACE STRAND 16 877 22 COLOUR_TEXT_REGION 16 877 22 877 51 STRAND 26 877 34 COLOUR_TEXT_REGION 26 877 34 877 51 STRAND 39 877 43 COLOUR_TEXT_REGION 39 877 43 877 51 STRAND 61 877 64 COLOUR_TEXT_REGION 61 877 64 877 51 STRAND 143 877 146 COLOUR_TEXT_REGION 143 877 146 877 51 STRAND 150 877 152 COLOUR_TEXT_REGION 150 877 152 877 51 HELIX 47 877 56 COLOUR_TEXT_REGION 47 877 56 877 50 HELIX 71 877 78 COLOUR_TEXT_REGION 71 877 78 877 50 HELIX 91 877 100 COLOUR_TEXT_REGION 91 877 100 877 50 HELIX 115 877 132 COLOUR_TEXT_REGION 115 877 132 877 50 STRAND 16 882 22 COLOUR_TEXT_REGION 16 882 22 882 51 STRAND 26 882 34 COLOUR_TEXT_REGION 26 882 34 882 51 STRAND 38 882 44 COLOUR_TEXT_REGION 38 882 44 882 51 STRAND 61 882 64 COLOUR_TEXT_REGION 61 882 64 882 51 STRAND 143 882 146 COLOUR_TEXT_REGION 143 882 146 882 51 STRAND 150 882 152 COLOUR_TEXT_REGION 150 882 152 882 51 HELIX 47 882 56 COLOUR_TEXT_REGION 47 882 56 882 50 HELIX 71 882 78 COLOUR_TEXT_REGION 71 882 78 882 50 HELIX 92 882 100 COLOUR_TEXT_REGION 92 882 100 882 50 HELIX 116 882 132 COLOUR_TEXT_REGION 116 882 132 882 50 STRAND 16 883 22 COLOUR_TEXT_REGION 16 883 22 883 51 STRAND 27 883 33 COLOUR_TEXT_REGION 27 883 33 883 51 STRAND 39 883 42 COLOUR_TEXT_REGION 39 883 42 883 51 STRAND 61 883 64 COLOUR_TEXT_REGION 61 883 64 883 51 STRAND 143 883 146 COLOUR_TEXT_REGION 143 883 146 883 51 STRAND 150 883 151 COLOUR_TEXT_REGION 150 883 151 883 51 HELIX 47 883 57 COLOUR_TEXT_REGION 47 883 57 883 50 HELIX 71 883 75 COLOUR_TEXT_REGION 71 883 75 883 50 HELIX 90 883 99 COLOUR_TEXT_REGION 90 883 99 883 50 HELIX 115 883 132 COLOUR_TEXT_REGION 115 883 132 883 50