SILENT_MODE BLOCK_FILE jp_1kQPf3T.concise.blc MAX_NSEQ 492 MAX_INPUT_LEN 494 OUTPUT_FILE jp_1kQPf3T.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 122 481 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 482 122 491 H SPACE SUB_CHARS 1 482 122 491 E SPACE SUB_CHARS 1 482 122 491 - SPACE STRAND 6 485 12 COLOUR_TEXT_REGION 6 485 12 485 51 STRAND 17 485 24 COLOUR_TEXT_REGION 17 485 24 485 51 STRAND 37 485 46 COLOUR_TEXT_REGION 37 485 46 485 51 STRAND 58 485 64 COLOUR_TEXT_REGION 58 485 64 485 51 STRAND 75 485 79 COLOUR_TEXT_REGION 75 485 79 485 51 STRAND 83 485 87 COLOUR_TEXT_REGION 83 485 87 485 51 STRAND 93 485 98 COLOUR_TEXT_REGION 93 485 98 485 51 HELIX 102 485 108 COLOUR_TEXT_REGION 102 485 108 485 50 HELIX 113 485 116 COLOUR_TEXT_REGION 113 485 116 485 50 STRAND 6 490 12 COLOUR_TEXT_REGION 6 490 12 490 51 STRAND 17 490 23 COLOUR_TEXT_REGION 17 490 23 490 51 STRAND 38 490 47 COLOUR_TEXT_REGION 38 490 47 490 51 STRAND 52 490 52 COLOUR_TEXT_REGION 52 490 52 490 51 STRAND 58 490 64 COLOUR_TEXT_REGION 58 490 64 490 51 STRAND 76 490 79 COLOUR_TEXT_REGION 76 490 79 490 51 STRAND 83 490 87 COLOUR_TEXT_REGION 83 490 87 490 51 STRAND 97 490 98 COLOUR_TEXT_REGION 97 490 98 490 51 HELIX 101 490 108 COLOUR_TEXT_REGION 101 490 108 490 50 HELIX 113 490 116 COLOUR_TEXT_REGION 113 490 116 490 50 STRAND 6 491 12 COLOUR_TEXT_REGION 6 491 12 491 51 STRAND 18 491 24 COLOUR_TEXT_REGION 18 491 24 491 51 STRAND 37 491 45 COLOUR_TEXT_REGION 37 491 45 491 51 STRAND 75 491 79 COLOUR_TEXT_REGION 75 491 79 491 51 STRAND 83 491 88 COLOUR_TEXT_REGION 83 491 88 491 51 STRAND 93 491 98 COLOUR_TEXT_REGION 93 491 98 491 51 HELIX 57 491 64 COLOUR_TEXT_REGION 57 491 64 491 50 HELIX 103 491 108 COLOUR_TEXT_REGION 103 491 108 491 50 HELIX 113 491 116 COLOUR_TEXT_REGION 113 491 116 491 50