SILENT_MODE BLOCK_FILE jp_WOUUx2k.concise.blc MAX_NSEQ 1540 MAX_INPUT_LEN 1542 OUTPUT_FILE jp_WOUUx2k.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 70 1529 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 1530 70 1539 H SPACE SUB_CHARS 1 1530 70 1539 E SPACE SUB_CHARS 1 1530 70 1539 - SPACE STRAND 20 1533 24 COLOUR_TEXT_REGION 20 1533 24 1533 51 STRAND 28 1533 33 COLOUR_TEXT_REGION 28 1533 33 1533 51 STRAND 37 1533 41 COLOUR_TEXT_REGION 37 1533 41 1533 51 HELIX 7 1533 16 COLOUR_TEXT_REGION 7 1533 16 1533 50 HELIX 50 1533 59 COLOUR_TEXT_REGION 50 1533 59 1533 50 HELIX 64 1533 68 COLOUR_TEXT_REGION 64 1533 68 1533 50 STRAND 19 1538 24 COLOUR_TEXT_REGION 19 1538 24 1538 51 STRAND 28 1538 33 COLOUR_TEXT_REGION 28 1538 33 1538 51 STRAND 38 1538 41 COLOUR_TEXT_REGION 38 1538 41 1538 51 HELIX 7 1538 16 COLOUR_TEXT_REGION 7 1538 16 1538 50 HELIX 50 1538 59 COLOUR_TEXT_REGION 50 1538 59 1538 50 HELIX 64 1538 68 COLOUR_TEXT_REGION 64 1538 68 1538 50 STRAND 20 1539 24 COLOUR_TEXT_REGION 20 1539 24 1539 51 STRAND 28 1539 33 COLOUR_TEXT_REGION 28 1539 33 1539 51 STRAND 37 1539 41 COLOUR_TEXT_REGION 37 1539 41 1539 51 HELIX 7 1539 16 COLOUR_TEXT_REGION 7 1539 16 1539 50 HELIX 50 1539 59 COLOUR_TEXT_REGION 50 1539 59 1539 50 HELIX 64 1539 68 COLOUR_TEXT_REGION 64 1539 68 1539 50