SILENT_MODE BLOCK_FILE jp_i86R0A6.concise.blc MAX_NSEQ 879 MAX_INPUT_LEN 881 OUTPUT_FILE jp_i86R0A6.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 180 868 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 869 180 878 H SPACE SUB_CHARS 1 869 180 878 E SPACE SUB_CHARS 1 869 180 878 - SPACE STRAND 4 872 10 COLOUR_TEXT_REGION 4 872 10 872 51 STRAND 21 872 27 COLOUR_TEXT_REGION 21 872 27 872 51 STRAND 38 872 40 COLOUR_TEXT_REGION 38 872 40 872 51 STRAND 47 872 50 COLOUR_TEXT_REGION 47 872 50 872 51 STRAND 73 872 75 COLOUR_TEXT_REGION 73 872 75 872 51 STRAND 85 872 90 COLOUR_TEXT_REGION 85 872 90 872 51 STRAND 100 872 103 COLOUR_TEXT_REGION 100 872 103 872 51 STRAND 115 872 120 COLOUR_TEXT_REGION 115 872 120 872 51 STRAND 147 872 148 COLOUR_TEXT_REGION 147 872 148 872 51 STRAND 175 872 178 COLOUR_TEXT_REGION 175 872 178 872 51 HELIX 34 872 34 COLOUR_TEXT_REGION 34 872 34 872 50 HELIX 37 872 37 COLOUR_TEXT_REGION 37 872 37 872 50 HELIX 57 872 68 COLOUR_TEXT_REGION 57 872 68 872 50 HELIX 76 872 78 COLOUR_TEXT_REGION 76 872 78 872 50 HELIX 125 872 133 COLOUR_TEXT_REGION 125 872 133 872 50 HELIX 158 872 171 COLOUR_TEXT_REGION 158 872 171 872 50 STRAND 4 877 10 COLOUR_TEXT_REGION 4 877 10 877 51 STRAND 21 877 27 COLOUR_TEXT_REGION 21 877 27 877 51 STRAND 37 877 41 COLOUR_TEXT_REGION 37 877 41 877 51 STRAND 47 877 50 COLOUR_TEXT_REGION 47 877 50 877 51 STRAND 73 877 77 COLOUR_TEXT_REGION 73 877 77 877 51 STRAND 85 877 90 COLOUR_TEXT_REGION 85 877 90 877 51 STRAND 99 877 104 COLOUR_TEXT_REGION 99 877 104 877 51 STRAND 115 877 120 COLOUR_TEXT_REGION 115 877 120 877 51 STRAND 147 877 148 COLOUR_TEXT_REGION 147 877 148 877 51 STRAND 175 877 178 COLOUR_TEXT_REGION 175 877 178 877 51 HELIX 58 877 68 COLOUR_TEXT_REGION 58 877 68 877 50 HELIX 125 877 133 COLOUR_TEXT_REGION 125 877 133 877 50 HELIX 157 877 171 COLOUR_TEXT_REGION 157 877 171 877 50 STRAND 4 878 11 COLOUR_TEXT_REGION 4 878 11 878 51 STRAND 22 878 27 COLOUR_TEXT_REGION 22 878 27 878 51 STRAND 86 878 88 COLOUR_TEXT_REGION 86 878 88 878 51 STRAND 120 878 120 COLOUR_TEXT_REGION 120 878 120 878 51 STRAND 147 878 149 COLOUR_TEXT_REGION 147 878 149 878 51 STRAND 176 878 178 COLOUR_TEXT_REGION 176 878 178 878 51 HELIX 33 878 39 COLOUR_TEXT_REGION 33 878 39 878 50 HELIX 47 878 51 COLOUR_TEXT_REGION 47 878 51 878 50 HELIX 55 878 67 COLOUR_TEXT_REGION 55 878 67 878 50 HELIX 73 878 79 COLOUR_TEXT_REGION 73 878 79 878 50 HELIX 112 878 119 COLOUR_TEXT_REGION 112 878 119 878 50 HELIX 125 878 133 COLOUR_TEXT_REGION 125 878 133 878 50 HELIX 158 878 172 COLOUR_TEXT_REGION 158 878 172 878 50