SILENT_MODE BLOCK_FILE jp_eH64AmL.concise.blc MAX_NSEQ 795 MAX_INPUT_LEN 797 OUTPUT_FILE jp_eH64AmL.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 332 784 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 785 332 794 H SPACE SUB_CHARS 1 785 332 794 E SPACE SUB_CHARS 1 785 332 794 - SPACE STRAND 68 788 72 COLOUR_TEXT_REGION 68 788 72 788 51 STRAND 77 788 81 COLOUR_TEXT_REGION 77 788 81 788 51 STRAND 107 788 113 COLOUR_TEXT_REGION 107 788 113 788 51 STRAND 134 788 138 COLOUR_TEXT_REGION 134 788 138 788 51 STRAND 160 788 165 COLOUR_TEXT_REGION 160 788 165 788 51 STRAND 172 788 175 COLOUR_TEXT_REGION 172 788 175 788 51 STRAND 266 788 272 COLOUR_TEXT_REGION 266 788 272 788 51 STRAND 299 788 300 COLOUR_TEXT_REGION 299 788 300 788 51 HELIX 6 788 19 COLOUR_TEXT_REGION 6 788 19 788 50 HELIX 24 788 38 COLOUR_TEXT_REGION 24 788 38 788 50 HELIX 47 788 59 COLOUR_TEXT_REGION 47 788 59 788 50 HELIX 87 788 104 COLOUR_TEXT_REGION 87 788 104 788 50 HELIX 118 788 129 COLOUR_TEXT_REGION 118 788 129 788 50 HELIX 178 788 192 COLOUR_TEXT_REGION 178 788 192 788 50 HELIX 212 788 217 COLOUR_TEXT_REGION 212 788 217 788 50 HELIX 227 788 242 COLOUR_TEXT_REGION 227 788 242 788 50 HELIX 280 788 294 COLOUR_TEXT_REGION 280 788 294 788 50 HELIX 304 788 314 COLOUR_TEXT_REGION 304 788 314 788 50 HELIX 322 788 330 COLOUR_TEXT_REGION 322 788 330 788 50 STRAND 68 793 72 COLOUR_TEXT_REGION 68 793 72 793 51 STRAND 77 793 81 COLOUR_TEXT_REGION 77 793 81 793 51 STRAND 107 793 112 COLOUR_TEXT_REGION 107 793 112 793 51 STRAND 134 793 138 COLOUR_TEXT_REGION 134 793 138 793 51 STRAND 160 793 165 COLOUR_TEXT_REGION 160 793 165 793 51 STRAND 171 793 176 COLOUR_TEXT_REGION 171 793 176 793 51 STRAND 266 793 272 COLOUR_TEXT_REGION 266 793 272 793 51 STRAND 299 793 300 COLOUR_TEXT_REGION 299 793 300 793 51 HELIX 6 793 19 COLOUR_TEXT_REGION 6 793 19 793 50 HELIX 24 793 37 COLOUR_TEXT_REGION 24 793 37 793 50 HELIX 47 793 58 COLOUR_TEXT_REGION 47 793 58 793 50 HELIX 88 793 104 COLOUR_TEXT_REGION 88 793 104 793 50 HELIX 118 793 130 COLOUR_TEXT_REGION 118 793 130 793 50 HELIX 178 793 192 COLOUR_TEXT_REGION 178 793 192 793 50 HELIX 212 793 216 COLOUR_TEXT_REGION 212 793 216 793 50 HELIX 227 793 242 COLOUR_TEXT_REGION 227 793 242 793 50 HELIX 280 793 294 COLOUR_TEXT_REGION 280 793 294 793 50 HELIX 305 793 314 COLOUR_TEXT_REGION 305 793 314 793 50 HELIX 322 793 330 COLOUR_TEXT_REGION 322 793 330 793 50 STRAND 68 794 72 COLOUR_TEXT_REGION 68 794 72 794 51 STRAND 77 794 81 COLOUR_TEXT_REGION 77 794 81 794 51 STRAND 107 794 113 COLOUR_TEXT_REGION 107 794 113 794 51 STRAND 133 794 139 COLOUR_TEXT_REGION 133 794 139 794 51 STRAND 160 794 165 COLOUR_TEXT_REGION 160 794 165 794 51 STRAND 267 794 273 COLOUR_TEXT_REGION 267 794 273 794 51 STRAND 300 794 300 COLOUR_TEXT_REGION 300 794 300 794 51 HELIX 6 794 19 COLOUR_TEXT_REGION 6 794 19 794 50 HELIX 24 794 38 COLOUR_TEXT_REGION 24 794 38 794 50 HELIX 47 794 59 COLOUR_TEXT_REGION 47 794 59 794 50 HELIX 87 794 104 COLOUR_TEXT_REGION 87 794 104 794 50 HELIX 120 794 128 COLOUR_TEXT_REGION 120 794 128 794 50 HELIX 179 794 193 COLOUR_TEXT_REGION 179 794 193 794 50 HELIX 212 794 218 COLOUR_TEXT_REGION 212 794 218 794 50 HELIX 227 794 242 COLOUR_TEXT_REGION 227 794 242 794 50 HELIX 280 794 293 COLOUR_TEXT_REGION 280 794 293 794 50 HELIX 304 794 315 COLOUR_TEXT_REGION 304 794 315 794 50 HELIX 322 794 330 COLOUR_TEXT_REGION 322 794 330 794 50